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PLM3_127_b2_sep16_scaffold_3165

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_3165_1
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..991
DNA (990bp) protein (330aa)
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
Proline--tRNA ligase Tax=Cycloclasticus sp. PY97M RepID=S2UFX4_9GAMM
PLM3_127_b2_sep16_scaffold_3165_2

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969..1562
DNA (594bp) protein (198aa)
Transglycosylase, putative Tax=Pseudomonas stutzeri RepID=A4VNB6_PSEU5
Uncharacterized protein {ECO:0000313|EMBL:KKN97955.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transglycosylase
PLM3_127_b2_sep16_scaffold_3165_3

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comp(1652..1933)
DNA (282bp) protein (94aa)
Acylphosphatase {ECO:0000313|EMBL:EQD62041.1}; EC=3.6.1.7 {ECO:0000313|EMBL:EQD62041.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
acylphosphatase (EC:3.6.1.7)
Acylphosphatase Tax=mine drainage metagenome RepID=T1AN56_9ZZZZ
PLM3_127_b2_sep16_scaffold_3165_4
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1941..2201)
DNA (261bp) protein (87aa)
Putative lipoprotein Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GUK5_THISH
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ACL73325.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
PLM3_127_b2_sep16_scaffold_3165_5
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2394..2984
DNA (591bp) protein (197aa)
NAD(P)H dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138}; EC=1.6.5.2 {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138};; NAD(P)H:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01017}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
NAD(P)H quinone oxidoreductase Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000371AC9E
flavoprotein WrbA
PLM3_127_b2_sep16_scaffold_3165_6
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3001..3696)
DNA (696bp) protein (232aa)
DNA replication initiation factor Tax=Halomonas zhanjiangensis RepID=UPI000364072F
DNA replication initiation factor
Tax=RBG_16_Gammaproteobacteria_57_12_curated
PLM3_127_b2_sep16_scaffold_3165_7

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comp(3703..4263)
DNA (561bp) protein (187aa)
CDP-alcohol phosphatidyltransferase (Fragment) Tax=mine drainage metagenome RepID=T1DEG9_9ZZZZ
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:EQD80405.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
CDP-alcohol phosphatidyltransferase
PLM3_127_b2_sep16_scaffold_3165_8
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4260..5228)
DNA (969bp) protein (323aa)
Putative uncharacterized protein Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G1A0_9GAMM
Putative exported protein {ECO:0000313|EMBL:KFZ90392.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_3165_9
Citrobacter rodentium, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5373..6407
DNA (1035bp) protein (345aa)
purM; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype; 4280).;"
Phosphoribosylformylglycinamidine cyclo-ligase Tax=Enterobacter cloacae UCICRE 3 RepID=V3GLS8_ENTCL
PLM3_127_b2_sep16_scaffold_3165_10
Dickeya solani, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6404..7081
DNA (678bp) protein (226aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya solani.;"
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
phosphoribosylglycinamide formyltransferase Tax=Dickeya zeae RepID=UPI00031E6B3C
PLM3_127_b2_sep16_scaffold_3165_11
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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7078..7788
DNA (711bp) protein (237aa)
Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YLG1_METFJ
Uncharacterized protein {ECO:0000313|EMBL:CDH46107.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
isoprenoid biosynthesis protein
PLM3_127_b2_sep16_scaffold_3165_12
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8098..8664)
DNA (567bp) protein (189aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase Tax=Thiothrix nivea DSM 5205 RepID=I3BPW6_9GAMM
PLM3_127_b2_sep16_scaffold_3165_13
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8661..9785)
DNA (1125bp) protein (375aa)
Uncharacterized protein Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GMA9_THISH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL73696.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
PLM3_127_b2_sep16_scaffold_3165_14
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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9949..10968
DNA (1020bp) protein (340aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036441F9
Serine/threonine protein kinase {ECO:0000313|EMBL:EHQ52382.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
PBS lyase
Displaying 14 items

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