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PLM3_127_b2_sep16_scaffold_3599

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_3599_1
Paraglaciecola polaris, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..169
DNA (168bp) protein (56aa)
hypothetical protein Tax=Salinimonas chungwhensis RepID=UPI000373D959
polyhydroxybutyrate depolymerase
Poly (3-hydroxybutyrate) depolymerase {ECO:0000313|EMBL:GAC32745.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola polaris LMG 21857.;"
PLM3_127_b2_sep16_scaffold_3599_2
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(216..659)
DNA (444bp) protein (148aa)
hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
PLM3_127_b2_sep16_scaffold_3599_3
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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814..2187
DNA (1374bp) protein (458aa)
Bifunctional protein GlmU Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RUX1_ALLVD
UDP-N-acetylglucosamine pyrophosphorylase
Tax=RBG_16_Gammaproteobacteria_57_12_curated
PLM3_127_b2_sep16_scaffold_3599_4
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2285..4117
DNA (1833bp) protein (611aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;"
glucosamine--fructose-6-phosphate aminotransferase Tax=Lamprocystis purpurea RepID=UPI00035C2660
glucosamine--fructose-6-phosphate aminotransferase
PLM3_127_b2_sep16_scaffold_3599_5
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4215..4826
DNA (612bp) protein (204aa)
Putative peptidoglycan binding protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LTH8_SYNAS
peptidoglycan binding protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM3_127_b2_sep16_scaffold_3599_6
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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4893..5507
DNA (615bp) protein (205aa)
Lysine exporter family protein Tax=Burkholderia multivorans CGD1 RepID=B9B2G6_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD04745.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
PLM3_127_b2_sep16_scaffold_3599_7
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5541..5966
DNA (426bp) protein (142aa)
Uncharacterized protein Tax=Flavobacterium sp. F52 RepID=J0RW81_9FLAO
Strain DSM 12611 Contig02, whole genome shotgun sequence {ECO:0000313|EMBL:KIO54701.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_3599_8
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5941..6384
DNA (444bp) protein (148aa)
hypothetical protein Tax=alpha proteobacterium LLX12A RepID=UPI00035E11AB
Uncharacterized protein {ECO:0000313|EMBL:EKU76722.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
PLM3_127_b2_sep16_scaffold_3599_9
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

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6550..7173
DNA (624bp) protein (208aa)
Protein tonB, putative Tax=Ricinus communis RepID=B9TC25_RICCO
Protein tonB, putative {ECO:0000313|EMBL:EEF26589.1}; species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
TonB family protein
PLM3_127_b2_sep16_scaffold_3599_10
unknown

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comp(7170..7457)
DNA (288bp) protein (96aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3599_11
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7454..7858)
DNA (405bp) protein (135aa)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI00037332BF
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_3599_12
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7867..8169)
DNA (303bp) protein (101aa)
Uncharacterized protein Tax=Azoarcus sp. KH32C RepID=H0PWY1_9RHOO
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
PLM3_127_b2_sep16_scaffold_3599_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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8659..9546
DNA (888bp) protein (296aa)
Putative uncharacterized protein Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YWE8_9ALTE
hypothetical protein
Tax=RBG_16_Gamma2_65_34_curated
PLM3_127_b2_sep16_scaffold_3599_14
Zea mays, Zea, Poales, commelinids, Streptophyta, Viridiplantae

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9524..10339
DNA (816bp) protein (272aa)
PREDICTED: keratin, type I cytoskeletal 9-like Tax=Xenopus tropicalis RepID=UPI00034FE38A
Uncharacterized protein {ECO:0000313|EMBL:AFW60218.1, ECO:0000313|EnsemblPlants:GRMZM2G478920_P01}; species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogoneae; Zea.;" source="Zea mays (Maize).;"
PLM3_127_b2_sep16_scaffold_3599_15
unknown

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10759..11550
DNA (792bp) protein (264aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3599_16
unknown

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11983..12387
DNA (405bp) protein (135aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3599_17
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12418..14091)
DNA (1674bp) protein (558aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CDH44899.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CDH44899.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
AMP-dependent synthetase and ligase Tax=Thauera RepID=N6XMT2_9RHOO
AMP-dependent synthetase and ligase
PLM3_127_b2_sep16_scaffold_3599_18
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14128..14727)
DNA (600bp) protein (200aa)
Multifunctional: acyl-CoA thioesterase I protease I lysophospholipaseL(I) {ECO:0000313|EMBL:CDH43549.1}; EC=3.1.1.5 {ECO:0000313|EMBL:CDH43549.1};; EC=3.1.2.- {ECO:0000313|EMBL:CDH43549.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
arylesterase (EC:3.1.1.2)
Arylesterase Tax=Methylomonas methanica (strain MC09) RepID=F9ZUZ2_METMM
PLM3_127_b2_sep16_scaffold_3599_19
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14768..15439
DNA (672bp) protein (224aa)
ABC transporter ATP-binding protein Tax=Pseudomonas aeruginosa RepID=M3BJP4_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:KFN47180.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
methionine ABC transporter ATP-binding protein
PLM3_127_b2_sep16_scaffold_3599_20
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15443..16147
DNA (705bp) protein (235aa)
Efflux ABC transporter, permease protein Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XAA7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CDI02034.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
hypothetical protein
Displaying 20 items

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