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PLM3_127_b2_sep16_scaffold_1254

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1254_1
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..941
DNA (939bp) protein (313aa)
NADH dehydrogenase Tax=Planctomyces maris DSM 8797 RepID=A6C9P3_9PLAN
NADH dehydrogenase {ECO:0000313|EMBL:KIG12390.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
ndh; NADH dehydrogenase
PLM3_127_b2_sep16_scaffold_1254_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1024..1206
DNA (183bp) protein (61aa)
hypothetical protein Tax=Methylomonas sp. MK1 RepID=UPI000367D34C
hemin transport system, hemin uptake protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_1254_3

Not on your lists

comp(1305..1787)
DNA (483bp) protein (161aa)
nucleotide-binding protein Tax=Methylohalobius crimeensis RepID=UPI0003B57044
Nucleotide-binding protein {ECO:0000313|EMBL:EQD56289.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein YajQ
PLM3_127_b2_sep16_scaffold_1254_4
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(1830..2366)
DNA (537bp) protein (179aa)
GCN5-related N-acetyltransferase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVV5_9CHLR
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EFH84338.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
acetyltransferase family protein
PLM3_127_b2_sep16_scaffold_1254_5
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2407..3663)
DNA (1257bp) protein (419aa)
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen Tax=Pontibacter sp. BAB1700 RepID=J1FMN7_9BACT
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:EJF11699.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
alkyl hydroperoxide reductase
PLM3_127_b2_sep16_scaffold_1254_6
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(3752..4369)
DNA (618bp) protein (206aa)
Glutathione S-transferase domain protein Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U4R1_9CYAN
glutathione S-transferase
Glutathione S-transferase domain protein {ECO:0000313|EMBL:AFY89406.1}; species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
PLM3_127_b2_sep16_scaffold_1254_7
unknown

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comp(4440..4787)
DNA (348bp) protein (116aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1254_8
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4919..5887
DNA (969bp) protein (323aa)
transcriptional regulator Tax=Pseudomonas sp. HYS RepID=UPI000299F57B
Transcriptional regulator {ECO:0000313|EMBL:KJB91488.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
gcvA; glycine cleavage system transcriptional activator
PLM3_127_b2_sep16_scaffold_1254_9
Chlorobaculum parvum, Chlorobaculum, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(5892..6266)
DNA (375bp) protein (125aa)
Putative uncharacterized protein Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=B3QM15_CHLP8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF10968.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum.;" source="Chlorobaculum parvum (strain NCIB 8327) (Chlorobium vibrioforme subsp.; thiosulfatophilum (strain DSM 263 / NCIB 8327)).;"
PLM3_127_b2_sep16_scaffold_1254_10

Not on your lists

6594..7136
DNA (543bp) protein (181aa)
Uncharacterized protein Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AS38_PSERE
Uncharacterized protein {ECO:0000313|EMBL:KKO01733.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1254_11
Pseudomonas sp. CFII68, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7245..7880
DNA (636bp) protein (212aa)
Uncharacterized protein Tax=Pseudomonas fluorescens F113 RepID=G8Q4J8_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPJ78676.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CFII68.;"
PLM3_127_b2_sep16_scaffold_1254_12
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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7880..8653
DNA (774bp) protein (258aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI0002E81FC5
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3_127_b2_sep16_scaffold_1254_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8650..10494)
DNA (1845bp) protein (615aa)
ABC transporter Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRH9_9GAMM
ABC transporter {ECO:0000313|EMBL:EIM02071.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ABC-type multidrug transport system, ATPase and permease component
PLM3_127_b2_sep16_scaffold_1254_14
unknown

Not on your lists

10707..11168
DNA (462bp) protein (154aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1254_15
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11180..11596)
DNA (417bp) protein (139aa)
hypothetical protein Tax=Arhodomonas aquaeolei RepID=UPI00035E9E74
Uncharacterized protein {ECO:0000313|EMBL:EAR21877.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1254_16
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11648..13318
DNA (1671bp) protein (557aa)
Nitrite/sulfite reductase protein Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q606F8_METCA
nitrite/sulfite reductase
Tax=RBG_16_Gammaproteobacteria_57_12_curated
PLM3_127_b2_sep16_scaffold_1254_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13293..13787
DNA (495bp) protein (165aa)
hypothetical protein Tax=Fodinicurvata sediminis RepID=UPI0003B6257E
oxidoreductase probably involved in sulfite reduction
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_1254_18
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13847..14539)
DNA (693bp) protein (231aa)
CysB family transcriptional regulator Tax=Spongiibacter tropicus RepID=UPI0003B51EA4
cysB; transcriptional regulator CysB
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
PLM3_127_b2_sep16_scaffold_1254_19
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(14808..15722)
DNA (915bp) protein (305aa)
glutamyl-tRNA reductase bin=GWB1_Deltaproteobacteria_rel_55_8 species=Leptospira kmetyi genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB1_Bdellovibrionales_55_8_curated
PLM3_127_b2_sep16_scaffold_1254_20
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15950..16672
DNA (723bp) protein (241aa)
cysH; phosphoadenosine phosphosulfate reductase (EC:1.8.4.8)
Probable cysH 5' adenylylsulfate aps reductase protein Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82W42_NITEU
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3_127_b2_sep16_scaffold_1254_21
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16676..18115
DNA (1440bp) protein (480aa)
precorrin-2 dehydrogenase (EC:1.3.1.76 2.1.1.107)
Siroheme synthase Tax=Pseudomonas stutzeri RCH2 RepID=L0GKR2_PSEST
Siroheme synthase {ECO:0000256|HAMAP-Rule:MF_01646}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri RCH2.;"
PLM3_127_b2_sep16_scaffold_1254_22
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18112..19143
DNA (1032bp) protein (344aa)
cysK1; cysteine synthase A (EC:2.5.1.47)
Probable cysteine synthase a protein {ECO:0000313|EMBL:CAD17427.1}; EC=2.5.1.47 {ECO:0000313|EMBL:CAD17427.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum).;"
cysteine synthase Tax=Cupriavidus sp. BIS7 RepID=UPI000304FEFD
PLM3_127_b2_sep16_scaffold_1254_23
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19127..20239
DNA (1113bp) protein (371aa)
Ferredoxin--NADP reductase {ECO:0000256|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000256|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000256|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000256|HAMAP-Rule:MF_01685};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;"
trxB2; thioredoxin reductase (EC:1.8.1.9)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00035F10D7
PLM3_127_b2_sep16_scaffold_1254_24
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20327..20701
DNA (375bp) protein (125aa)
Uncharacterized protein Tax=Rhodanobacter denitrificans RepID=M4NBY8_9GAMM
Tic20 domain containing protein {ECO:0000313|EMBL:KGQ20706.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1254_25
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20722..21378
DNA (657bp) protein (219aa)
regulatory protein Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003060C6A
Regulatory protein {ECO:0000313|EMBL:AKC87880.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
FMN-binding negative transcriptional regulator
PLM3_127_b2_sep16_scaffold_1254_26
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

comp(21375..21680)
DNA (306bp) protein (102aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI000371AF57
membrane protein
Membrane protein {ECO:0000313|EMBL:AKC83701.1}; species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
PLM3_127_b2_sep16_scaffold_1254_27
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

21977..23395
DNA (1419bp) protein (473aa)
anthranilate synthase component I (EC:4.1.3.27)
Fragment of Anthranilate synthase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFE8_9BACT
Tax=RBG_13_OP8X_37_8_curated
PLM3_127_b2_sep16_scaffold_1254_28
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

23392..24018
DNA (627bp) protein (209aa)
Glutamine amidotransferase of anthranilate synthase Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RDF1_AMMDK
glutamine amidotransferase of anthranilate synthase
Glutamine amidotransferase of anthranilate synthase {ECO:0000313|EMBL:ACX52278.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Ammonifex degensii (strain DSM 10501 / KC4).;"
PLM3_127_b2_sep16_scaffold_1254_29
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

23990..25021
DNA (1032bp) protein (344aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Ammonifex degensii (strain DSM 10501 / KC4).;"
Anthranilate phosphoribosyltransferase Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RDF0_AMMDK
anthranilate phosphoribosyltransferase
PLM3_127_b2_sep16_scaffold_1254_30
Streptomyces coelicoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25018..25854
DNA (837bp) protein (279aa)
Indole-3-glycerol phosphate synthase Tax=Streptomyces coelicoflavus ZG0656 RepID=H1Q5T0_9ACTO
Indole-3-glycerol-phosphate synthase {ECO:0000313|EMBL:EHN80155.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicoflavus ZG0656.;"
trpC; indole-3-glycerol phosphate synthase
Displaying items 1-30 of 41 in total

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