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PLM3_127_b2_sep16_scaffold_1401

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Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1401_1
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..473
DNA (471bp) protein (157aa)
Uncharacterized protein Tax=Methylomonas methanica (strain MC09) RepID=F9ZZA0_METMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG01126.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
PLM3_127_b2_sep16_scaffold_1401_2
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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483..896
DNA (414bp) protein (138aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003827D4C
Uncharacterized protein {ECO:0000313|EMBL:KGM52037.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1401_3
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1026..1730
DNA (705bp) protein (235aa)
ammonium transporter family protein (EC:4.6.1.2)
UPI0003D05AF6 related cluster Tax=unknown RepID=UPI0003D05AF6
Ammonium transporter {ECO:0000313|EMBL:ESZ19557.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
PLM3_127_b2_sep16_scaffold_1401_4
Rhodobacteraceae bacterium KLH11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1717..2373
DNA (657bp) protein (219aa)
ammonium transporter Tax=Ruegeria conchae RepID=UPI000237A5E3
Ammonium transporter family protein {ECO:0000313|EMBL:EEE34960.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium KLH11.;"
ammonium transporter family protein
PLM3_127_b2_sep16_scaffold_1401_5
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2396..2632
DNA (237bp) protein (79aa)
Uncharacterized protein Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JWG5_9RHOB
Putative uncharacterized protein {ECO:0000313|EMBL:EDZ41254.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium HTCC2083.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1401_6
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(2693..4075)
DNA (1383bp) protein (461aa)
N-methylglutamate synthase subunit C precursor (EC:2.1.1.21)
N-methylglutamate synthase subunit C Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U6J3_9CYAN
Glutamate synthase {ECO:0000313|EMBL:KIF21462.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
PLM3_127_b2_sep16_scaffold_1401_7
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4080..4817)
DNA (738bp) protein (246aa)
protein glxC Tax=Rhodocyclaceae RepID=UPI0003816F76
glutamate synthase subunit alpha
Tax=BJP_IG2103_Rhodocyclales_63_50
PLM3_127_b2_sep16_scaffold_1401_8
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4805..5701)
DNA (897bp) protein (299aa)
glutamine amidotransferase Tax=Methyloversatilis universalis RepID=UPI000374A874
Uncharacterized protein {ECO:0000313|EMBL:EUC15350.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
glutamine amidotransferase
PLM3_127_b2_sep16_scaffold_1401_9
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(5717..7051)
DNA (1335bp) protein (445aa)
gamma-glutamylmethylamide synthetase (EC:6.3.4.12)
Gamma-glutamylmethylamide synthetase Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U728_9CYAN
Glutamine synthetase {ECO:0000313|EMBL:KIF21459.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
PLM3_127_b2_sep16_scaffold_1401_10
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

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comp(7067..7636)
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Burkholderia sp. BT03 RepID=J3B605_9BURK
Methylglutamate dehydrogenase {ECO:0000313|EMBL:KIF21458.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1401_11
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7633..10527)
DNA (2895bp) protein (965aa)
N-methyl glutamate dehydrogenase/oxidoreductase subunit C Tax=Methyloversatilis universalis FAM5 RepID=F5RH05_9RHOO
glycine cleavage T protein (aminomethyl transferase)
Tax=BJP_IG2103_Rhodocyclales_63_50
PLM3_127_b2_sep16_scaffold_1401_12
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10524..10796)
DNA (273bp) protein (91aa)
N-methylglutamate dehydrogenase subunit B (EC:1.5.99.5)
sarcosine oxidase subunit delta Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00037D484D
Tax=BJP_IG2103_Rhodocyclales_63_50
PLM3_127_b2_sep16_scaffold_1401_13
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10813..12000)
DNA (1188bp) protein (396aa)
FAD dependent oxidoreductase Tax=Burkholderia RepID=I5CR65_9BURK
FAD dependent oxidoreductase {ECO:0000313|EMBL:EUC15345.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
FAD dependent oxidoreductase
PLM3_127_b2_sep16_scaffold_1401_14
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

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12175..12777
DNA (603bp) protein (201aa)
Transcriptional regulator, XRE family with cupin sensor Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U733_9CYAN
XRE family transcriptional regulator
Transcriptional regulator, XRE family with cupin sensor {ECO:0000313|EMBL:AFY90054.1}; species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
PLM3_127_b2_sep16_scaffold_1401_15
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12852..14189)
DNA (1338bp) protein (446aa)
ATP-dependent protease ATPase subunit HslU Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=HSLU_THISH
heat shock protein HslVU, ATPase subunit HslU
ATP-dependent protease ATPase subunit HslU {ECO:0000255|HAMAP-Rule:MF_00249}; Unfoldase HslU {ECO:0000255|HAMAP-Rule:MF_00249}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
PLM3_127_b2_sep16_scaffold_1401_16
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14189..14737)
DNA (549bp) protein (183aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichromatium purpuratum 984.;"
ATP-dependent protease subunit HslV Tax=Marichromatium purpuratum 984 RepID=F9TZP9_MARPU
peptidase
PLM3_127_b2_sep16_scaffold_1401_17
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14833..15741)
DNA (909bp) protein (303aa)
Tyrosine recombinase XerC Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GT91_THISH
tyrosine recombinase XerC
Tax=RBG_16_Gammaproteobacteria_51_14_curated
PLM3_127_b2_sep16_scaffold_1401_18

Not on your lists

comp(15738..16451)
DNA (714bp) protein (238aa)
Protein containing DUF484 (Fragment) Tax=mine drainage metagenome RepID=T0ZEW1_9ZZZZ
Protein containing DUF484 {ECO:0000313|EMBL:EQD28185.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1401_19
Halomonas sp. PBN3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16495..17325)
DNA (831bp) protein (277aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. PBN3.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase Tax=Halomonas sp. PBN3 RepID=U7P964_9GAMM
PLM3_127_b2_sep16_scaffold_1401_20
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17428..18069
DNA (642bp) protein (214aa)
cobyrinic acid a,c-diamide synthase Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000378D54F
Uncharacterized protein {ECO:0000313|EMBL:AKH21051.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
cobyrinic acid ac-diamide synthase
PLM3_127_b2_sep16_scaffold_1401_21
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18088..19146
DNA (1059bp) protein (353aa)
hypothetical protein Tax=Arhodomonas aquaeolei RepID=UPI00036F253A
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:CDI03630.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
oxidoreductase FAD/NAD(P)-binding domain-containing protein
PLM3_127_b2_sep16_scaffold_1401_22
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19153..19392)
DNA (240bp) protein (80aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003684B77
HemY-like protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
PLM3_127_b2_sep16_scaffold_1401_23
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19352..20314)
DNA (963bp) protein (321aa)
HemY protein Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BV55_9GAMM
HemY protein {ECO:0000313|EMBL:BAN68087.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
conserved hypothetical protein
PLM3_127_b2_sep16_scaffold_1401_24
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20311..21396)
DNA (1086bp) protein (362aa)
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:BAN68088.1}; EC=2.1.1.107 {ECO:0000313|EMBL:BAN68088.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
Uroporphyrin-III C-methyltransferase Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6B9I9_9GAMM
hemX; hypothetical protein
PLM3_127_b2_sep16_scaffold_1401_25
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21459..22190)
DNA (732bp) protein (244aa)
chemotaxis protein CheY Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036C47DE
response regulator receiver protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
PLM3_127_b2_sep16_scaffold_1401_26
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22187..23287)
DNA (1101bp) protein (367aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037EAF7D
sensory transduction protein kinase AlgZ
Tax=BJP_IG2102_Gammaproteobacteria_62_140
PLM3_127_b2_sep16_scaffold_1401_27

Not on your lists

comp(23291..24187)
DNA (897bp) protein (299aa)
6-phosphogluconate dehydrogenase NAD-binding protein (Fragment) Tax=mine drainage metagenome RepID=T0Z071_9ZZZZ
6-phosphogluconate dehydrogenase NAD-binding protein {ECO:0000313|EMBL:EQD41356.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Gfo/Idh/MocA family oxidoreductase
PLM3_127_b2_sep16_scaffold_1401_28
unknown

Not on your lists

comp(24294..24755)
DNA (462bp) protein (154aa)
hypothetical protein
PLM3_127_b2_sep16_scaffold_1401_29
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24793..25131)
DNA (339bp) protein (113aa)
Uncharacterized protein Tax=Pseudomonas stutzeri TS44 RepID=I4JQQ8_PSEST
Uncharacterized protein {ECO:0000313|EMBL:EIK54798.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri TS44.;"
nitrogen regulatory protein P-II 1
PLM3_127_b2_sep16_scaffold_1401_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(25273..26727)
DNA (1455bp) protein (485aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003787F26
ammonia channel protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Displaying items 1-30 of 40 in total

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