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PLM3_127_b2_sep16_scaffold_1943

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1943_1
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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1..759
DNA (759bp) protein (253aa)
membrane protein Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003731F15
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_1943_2
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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928..2235
DNA (1308bp) protein (436aa)
Isocitrate dehydrogenase Tax=Methyloglobulus morosus KoM1 RepID=V5BZ24_9GAMM
isocitrate dehydrogenase
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
PLM3_127_b2_sep16_scaffold_1943_3
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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2262..3986
DNA (1725bp) protein (575aa)
isocitrate dehydrogenase Tax=Arenimonas oryziterrae RepID=UPI0003B405A6
aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
PLM3_127_b2_sep16_scaffold_1943_4
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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comp(4024..5199)
DNA (1176bp) protein (392aa)
methionine gamma-lyase; K01761 methionine-gamma-lyase [EC:4.4.1.11] bin=bin9_gal15 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
methionine gamma-lyase (EC:4.4.1.11)
Tax=CSP1_3_Armatimonadetes
PLM3_127_b2_sep16_scaffold_1943_5
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5242..6405
DNA (1164bp) protein (388aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KGI77942.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
Acyl-CoA dehydrogenase domain protein bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
acyl-CoA dehydrogenase
PLM3_127_b2_sep16_scaffold_1943_6
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6374..7573)
DNA (1200bp) protein (400aa)
putative aminotransferase (EC:2.6.1.-)
Putative aminotransferase {ECO:0000313|EMBL:CDR92433.1}; EC=2.6.1.- {ECO:0000313|EMBL:CDR92433.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes.;"
aminotransferase Tax=Pseudomonas alcaliphila RepID=UPI0002EFA5C5
PLM3_127_b2_sep16_scaffold_1943_7
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7548..8312)
DNA (765bp) protein (255aa)
Putative polyphosphate glucokinase Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7BRU1_STRBB
polyphosphate glucokinase
Polyphosphate glucokinase {ECO:0000313|EMBL:BAP55011.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
PLM3_127_b2_sep16_scaffold_1943_8
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8313..9152)
DNA (840bp) protein (280aa)
Putrescine ABC transporter, permease protein Tax=Azospirillum brasilense Sp245 RepID=G8ALX4_AZOBR
Putrescine/spermidine ABC transporter permease {ECO:0000313|EMBL:KJB97130.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
potI; putrescine ABC transporter, permease protein
PLM3_127_b2_sep16_scaffold_1943_9
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9152..10156)
DNA (1005bp) protein (335aa)
putrescine/spermidine ABC transporter permease Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003782CA1
Putrescine transport system permease protein PotH {ECO:0000313|EMBL:EXI81148.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
spermidine/putrescine ABC transporter
PLM3_127_b2_sep16_scaffold_1943_10
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10190..11332)
DNA (1143bp) protein (381aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
Putrescine transport ATP-binding protein Tax=Azospirillum amazonense Y2 RepID=G1XZJ8_9PROT
ABC transporter ATP-binding protein
PLM3_127_b2_sep16_scaffold_1943_11
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11429..12574)
DNA (1146bp) protein (382aa)
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
Family 1 extracellular solute-binding protein bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
potF; putrescine-binding periplasmic protein
PLM3_127_b2_sep16_scaffold_1943_12
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12632..14005)
DNA (1374bp) protein (458aa)
Glutamate--putrescine ligase {ECO:0000313|EMBL:EUC15498.1}; EC=6.3.1.11 {ECO:0000313|EMBL:EUC15498.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
glutamate--putrescine ligase (EC:6.3.1.11)
Glutamine synthetase Tax=Burkholderia sp. BT03 RepID=J2HN57_9BURK
PLM3_127_b2_sep16_scaffold_1943_13

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comp(13974..14669)
DNA (696bp) protein (232aa)
Glutamine amidotransferase, class I Tax=mine drainage metagenome RepID=T1ANX1_9ZZZZ
Glutamine amidotransferase, class I {ECO:0000313|EMBL:EQD43785.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase
Displaying 13 items

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