name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM3_127_b2_sep16_scaffold_624_1
unknown
|
Not on your lists |
comp(1..261)
|
This feature has no annotations |
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PLM3_127_b2_sep16_scaffold_624_2
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(488..1021)
|
Uncharacterized protein Tax=Alcanivorax pacificus W11-5 RepID=K2FXD5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD46719.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax pacificus W11-5.;"
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PLM3_127_b2_sep16_scaffold_624_3
Halomonas hydrothermalis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1068..1616)
|
peptidase M23 Tax=Halomonas stevensii RepID=UPI00030F7263
Peptidase M23 {ECO:0000313|EMBL:KHJ51400.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas hydrothermalis.;"
peptidase M23
|
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PLM3_127_b2_sep16_scaffold_624_4
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1636..2094
|
sulfurtransferase Tax=Thioalkalivibrio sp. ALJ16 RepID=UPI00035DF5C9
yibN_[H]; Rhodanese domain protein
Rhodanese domain protein {ECO:0000313|EMBL:AGA35357.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
|
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PLM3_127_b2_sep16_scaffold_624_5
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
2091..2348
|
Glutaredoxin Tax=Pseudomonas stutzeri DSM 10701 RepID=I6Z8Z9_PSEST
glutaredoxin
Uncharacterized protein {ECO:0000313|EMBL:AFN79687.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri DSM 10701.;"
|
|
PLM3_127_b2_sep16_scaffold_624_6 |
Not on your lists |
2345..2818
|
Preprotein translocase subunit SecB Tax=mine drainage metagenome RepID=T0ZHU7_9ZZZZ
Preprotein translocase subunit SecB {ECO:0000313|EMBL:EQD44263.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
secB; protein-export protein SecB
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PLM3_127_b2_sep16_scaffold_624_7
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
2846..3865
|
gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZI53_9GAMM
Tax=BJP_IG2102_Gammaproteobacteria_62_140
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PLM3_127_b2_sep16_scaffold_624_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria
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Not on your lists |
comp(3862..4320)
|
yibK; RNA methyltransferase TrmH, group 2 (EC:2.1.1.-)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PHX5_9BACT
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PLM3_127_b2_sep16_scaffold_624_9
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
4412..5299
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Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
diguanylate cyclase Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003712896
diguanylate cyclase
|
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PLM3_127_b2_sep16_scaffold_624_10
Halorhodospira halophila, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(5317..6723)
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Nitrogen metabolism transcriptional regulator, NtrC, Fis Family Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WWC8_HALHL
nitrogen metabolism transcriptional regulator NtrC
Nitrogen metabolism transcriptional regulator, NtrC, Fis Family {ECO:0000313|EMBL:ABM61990.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halophila (strain DSM 244 / SL1) (Ectothiorhodospira; halophila (strain DSM 244 / SL1)).;"
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PLM3_127_b2_sep16_scaffold_624_11 |
Not on your lists |
comp(6713..7813)
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Signal transduction histidine kinase, nitrogen specific, NtrB (Fragment) Tax=mine drainage metagenome RepID=T1CQB1_9ZZZZ
Signal transduction histidine kinase, nitrogen specific, NtrB {ECO:0000313|EMBL:EQD70694.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
signal transduction histidine kinase, nitrogen specific, NtrB
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PLM3_127_b2_sep16_scaffold_624_12
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(7860..8411)
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Uncharacterized protein Tax=Nitrococcus mobilis Nb-231 RepID=A4BTX1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR20792.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
predicted periplasmic protein
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PLM3_127_b2_sep16_scaffold_624_13
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(8530..9939)
|
glnA; glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase; EC=6.3.1.2;; Glutamate--ammonia ligase; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
Glutamine synthetase Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=GLNA_METCA
|
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PLM3_127_b2_sep16_scaffold_624_14 |
Not on your lists |
10308..11243
|
glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
Glycyl-tRNA synthetase subunit alpha Tax=mine drainage metagenome RepID=T1BJ78_9ZZZZ
Glycyl-tRNA synthetase subunit alpha {ECO:0000313|EMBL:EQD69802.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
|
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PLM3_127_b2_sep16_scaffold_624_15
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11240..13339
|
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
glycine--tRNA ligase (EC:6.1.1.14)
glycyl-tRNA synthetase Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000363E153
|
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PLM3_127_b2_sep16_scaffold_624_16 |
Not on your lists |
13341..14051
|
Phospholipid/glycerol acyltransferase (Fragment) Tax=mine drainage metagenome RepID=T1ASB9_9ZZZZ
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:EQD44950.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
phospholipid/glycerol acyltransferase
|
|
PLM3_127_b2_sep16_scaffold_624_17
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(14070..16487)
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DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
DNA gyrase subunit B Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6CE95_9GAMM
gyrB; DNA gyrase subunit B
|
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PLM3_127_b2_sep16_scaffold_624_18
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16480..17580)
|
DNA replication and repair protein RecF Tax=Plesiomonas shigelloides 302-73 RepID=R8AS65_PLESH
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|SAAS:SAAS00122784}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
recombinase RecF
|
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PLM3_127_b2_sep16_scaffold_624_19
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17616..18713)
|
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
DNA polymerase III subunit beta Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035C65A9
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PLM3_127_b2_sep16_scaffold_624_20
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(18918..20258)
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chromosomal replication initiation protein Tax=Arhodomonas aquaeolei RepID=UPI00036B779B
dnaA; chromosome replication initiator DnaA
Chromosomal replication initiator protein DnaA {ECO:0000255|HAMAP-Rule:MF_00377}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
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PLM3_127_b2_sep16_scaffold_624_21 |
Not on your lists |
20981..21232
|
Protein containing DUF37 Tax=mine drainage metagenome RepID=T1C6J7_9ZZZZ
Protein containing DUF37 {ECO:0000313|EMBL:EQD60924.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
|
|
PLM3_127_b2_sep16_scaffold_624_22
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21225..22919
|
Membrane protein insertase YidC Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=YIDC_THISH
protein translocase subunit YidC
Membrane protein insertase YidC {ECO:0000255|HAMAP-Rule:MF_01810}; Foldase YidC {ECO:0000255|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000255|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000255|HAMAP-Rule:MF_01810}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
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PLM3_127_b2_sep16_scaffold_624_23
unknown
|
Not on your lists |
comp(23011..23181)
|
This feature has no annotations |
|
PLM3_127_b2_sep16_scaffold_624_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23695..24717
|
Predicted GTPase bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GTPase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
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PLM3_127_b2_sep16_scaffold_624_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24734..25378)
|
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI000364D870
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
|
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PLM3_127_b2_sep16_scaffold_624_26
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25592..26944
|
tRNA modification GTPase MnmE Tax=Erwinia billingiae (strain Eb661) RepID=D8MMI8_ERWBE
Uncharacterized protein {ECO:0000313|EMBL:AKH21110.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
trmE; tRNA modification GTPase
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PLM3_127_b2_sep16_scaffold_624_27
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27034..27600
|
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035EB809
Uncharacterized protein {ECO:0000313|EMBL:KHF25263.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
hypothetical protein
|
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PLM3_127_b2_sep16_scaffold_624_28
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria
|
Not on your lists |
comp(27657..28238)
|
TIGR00730 family protein Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GFL2_9CYAN
TIGR00730 family protein {ECO:0000313|EMBL:EKQ67772.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanobacterium JSC-12.;"
LOG family protein
|
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PLM3_127_b2_sep16_scaffold_624_29
R_Acidobacteria_61_28, Acidobacteria, Bacteria
|
Not on your lists |
comp(28253..29725)
|
Uncharacterized protein Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TXH8_9CYAN
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
|
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PLM3_127_b2_sep16_scaffold_624_30
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29809..30621
|
Hydratase/decarboxylase Tax=Methylobacterium sp. (strain 4-46) RepID=B0UD95_METS4
hydratase/decarboxylase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
|