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PLM3_127_b2_sep16_scaffold_965

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_965_1
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..818)
DNA (816bp) protein (272aa)
hss; homospermidine synthase (EC:2.5.1.44)
Homospermidine synthase {ECO:0000313|EMBL:ACI99116.1}; EC=2.5.1.44 {ECO:0000313|EMBL:ACI99116.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Homospermidine synthase Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6INL9_RHOCS
PLM3_127_b2_sep16_scaffold_965_2

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comp(926..1609)
DNA (684bp) protein (228aa)
Maleylacetoacetate isomerase (Fragment) Tax=mine drainage metagenome RepID=T1A3E2_9ZZZZ
Maleylacetoacetate isomerase {ECO:0000313|EMBL:EQD51403.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_965_3
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2074..2958
DNA (885bp) protein (295aa)
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2)
3-mercaptopyruvate sulfurtransferase Tax=Nitrosococcus oceani RepID=Q3JDI4_NITOC
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
PLM3_127_b2_sep16_scaffold_965_4
CG_CP02_01, CG_CP02, Bacteria

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2998..5010
DNA (2013bp) protein (671aa)
arginine decarboxylase (EC:4.1.1.19)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0003192E87
Tax=CG_CP02_01
PLM3_127_b2_sep16_scaffold_965_5

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5364..5657
DNA (294bp) protein (98aa)
RNP-1 like RNA-binding protein Tax=mine drainage metagenome RepID=T0ZDM6_9ZZZZ
RNP-1 like RNA-binding protein {ECO:0000313|EMBL:EQD27945.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
RNP-1 like RNA-binding protein
PLM3_127_b2_sep16_scaffold_965_6
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5730..6584
DNA (855bp) protein (285aa)
Uncharacterized protein Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IUE5_RHOCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ00125.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
PLM3_127_b2_sep16_scaffold_965_7
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6705..7292)
DNA (588bp) protein (196aa)
Uncharacterized conserved protein UCP033924 Tax=Marichromatium purpuratum 984 RepID=F9U136_MARPU
Conserved exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CCQ73259.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
PLM3_127_b2_sep16_scaffold_965_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7361..9436)
DNA (2076bp) protein (692aa)
uvrD; ATP-dependent DNA helicase protein (EC:3.6.1.-)
ATP-dependent DNA helicase protein Tax=Acetobacter pasteurianus 386B RepID=S6CZY1_ACEPA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_965_9
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9546..9962
DNA (417bp) protein (139aa)
Conserved hypothetical membrane protein Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21PU6_SACD2
hypothetical protein
Conserved hypothetical membrane protein {ECO:0000313|EMBL:ABD79274.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024).;"
PLM3_127_b2_sep16_scaffold_965_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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9964..10485
DNA (522bp) protein (174aa)
ADP-ribose pyrophosphatase Tax=Thioflavicoccus mobilis 8321 RepID=L0H1A3_9GAMM
ADP-ribose pyrophosphatase
Tax=RBG_16_Gamma2_65_34_curated
PLM3_127_b2_sep16_scaffold_965_11
unknown

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10741..10986
DNA (246bp) protein (82aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_965_12
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11020..11685)
DNA (666bp) protein (222aa)
Putative uncharacterized protein Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KC90_NITWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ29761.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
PLM3_127_b2_sep16_scaffold_965_13
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11687..12316)
DNA (630bp) protein (210aa)
Putative uncharacterized protein Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KC91_NITWC
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
PLM3_127_b2_sep16_scaffold_965_14
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

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12548..13858
DNA (1311bp) protein (437aa)
hypothetical protein Tax=Singularimonas variicoloris RepID=UPI00037348FA
arabinose efflux permease family protein
Arabinose efflux permease family protein {ECO:0000313|EMBL:AFZ26161.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermum.;" source="Cylindrospermum stagnale PCC 7417.;"
PLM3_127_b2_sep16_scaffold_965_15
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

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13866..14318
DNA (453bp) protein (151aa)
Glutathione S-transferase {ECO:0000313|EMBL:KHF26385.1}; EC=2.5.1.18 {ECO:0000313|EMBL:KHF26385.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
Glutathione S-transferase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QGL5_AZOSU
glutathione S-transferase
PLM3_127_b2_sep16_scaffold_965_16
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14445..15155)
DNA (711bp) protein (237aa)
Short-chain dehydrogenase/reductase SDR Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KA77_NITWC
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADJ27392.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
PLM3_127_b2_sep16_scaffold_965_17
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15205..17265
DNA (2061bp) protein (687aa)
Uncharacterized protein Tax=Massilia timonae CCUG 45783 RepID=K9DJN6_9BURK
Peptidase S9 {ECO:0000313|EMBL:KGF80431.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
prolyl oligopeptidase family protein
PLM3_127_b2_sep16_scaffold_965_18
gamma proteobacterium NOR5-3, Gammaproteobacteria, Proteobacteria, Bacteria

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17448..18098
DNA (651bp) protein (217aa)
Putative uncharacterized protein Tax=gamma proteobacterium NOR5-3 RepID=B8KJN4_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EED34050.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium NOR5-3.;"
PLM3_127_b2_sep16_scaffold_965_19

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comp(18141..19175)
DNA (1035bp) protein (345aa)
ddlA; D-alanine-D-alanine ligase (EC:6.3.2.4)
D-alanine-D-alanine ligase (Fragment) Tax=mine drainage metagenome RepID=T0YGT6_9ZZZZ
D-alanine-D-alanine ligase {ECO:0000313|EMBL:EQD34666.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PLM3_127_b2_sep16_scaffold_965_20

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comp(19172..20239)
DNA (1068bp) protein (356aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T1BP57_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD71607.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_965_21
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(20367..21893)
DNA (1527bp) protein (509aa)
ADP-ribosylglycohydrolase Tax=Microcoleus sp. PCC 7113 RepID=K9WJ07_9CYAN
ADP-ribosylglycohydrolase
ADP-ribosylglycohydrolase {ECO:0000313|EMBL:AFZ20390.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
PLM3_127_b2_sep16_scaffold_965_22
unknown

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comp(21890..22045)
DNA (156bp) protein (52aa)

This feature has no annotations

Displaying 22 items

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