ggKbase home page

PLM3_127_b2_sep16_scaffold_5930_1

Organism: PLM3_127_b2_sep16_Gammaproteobacteria_64_8

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(111..362)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Smaragdicoccus niigatensis RepID=UPI0003815310 similarity UNIREF
DB: UNIREF100
  • Identity: 44.6
  • Coverage: 65.0
  • Bit_score: 67
  • Evalue 7.00e-09
signal transduction protein similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 70.0
  • Bit_score: 63
  • Evalue 2.90e-08
Putative signal transduction protein with EFhand domain {ECO:0000313|EMBL:ABZ76553.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella halifaxensis (strain HAW-EB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 70.0
  • Bit_score: 63
  • Evalue 1.40e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shewanella halifaxensis → Shewanella → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
ATGCCACGCTCAAGAAAGGGCGATCGTTTGGTACTCGAGCCGGAGCTCAAGCAGGAGCTGAAGGAAGACTTCGAGCAGGCCGACAGCGATGGCGACGGTCGCATCAACTTTGCCGAATTCAGCAGCCTGCTGGAGGACCTCGAATCGGGAATGTCGGCCGAGGAACTGCGCATCGGCTTCCACGAGATAGACACAGACCACGATGGCCGCATCGACCTGCCGGAGTTCATCGCCTGGTGGACGGAGTCGTGA
PROTEIN sequence
Length: 84
MPRSRKGDRLVLEPELKQELKEDFEQADSDGDGRINFAEFSSLLEDLESGMSAEELRIGFHEIDTDHDGRIDLPEFIAWWTES*