ggKbase home page

PLM3_127_b2_sep16_scaffold_6980_2

Organism: PLM3_127_b2_sep16_Gammaproteobacteria_64_8

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 1072..1356

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion outer membrane protein, TolC family Tax=Methylophaga thiooxydans DMS010 RepID=C0N6J0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 78.0
  • Bit_score: 102
  • Evalue 1.70e-19
type I secretion outer membrane protein, TolC precursor similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 77.0
  • Bit_score: 95
  • Evalue 7.70e-18
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 76.0
  • Bit_score: 104
  • Evalue 6.30e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gammaproteobacteria_56_15 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
TTGAAGCAGGCGCTCGAATCGAGTCGCACCGCACTGCAAGCGACTGAAGCCGGCTACGAAGTGGGCACGCGCACGGCCGTCGATGTCCTCGACGCACGACGGCGGCTGGCGGAAGCAGAGACCAACTACGCACGCAGCCGTTACGACTATCTCATCAACACCGTACGTCTCAAGCTTGCCGCGGGGATTCTCAAGCCCGACGACGTGGCCGACATCAATCAGTGGCTGGCGGCTGCAGCGACGACACCGACGCAACCCACGGCGCCGGCACCGCCTCAGTCATAA
PROTEIN sequence
Length: 95
LKQALESSRTALQATEAGYEVGTRTAVDVLDARRRLAEAETNYARSRYDYLINTVRLKLAAGILKPDDVADINQWLAAAATTPTQPTAPAPPQS*