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PLM3_127_b2_sep16_scaffold_6980

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_6980_1
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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65..1075
DNA (1011bp) protein (337aa)
Transcriptional regulator TetR family Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DD13_9GAMM
type I secretion protein TolC
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
PLM3_127_b2_sep16_scaffold_6980_2
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

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1072..1356
DNA (285bp) protein (95aa)
Type I secretion outer membrane protein, TolC family Tax=Methylophaga thiooxydans DMS010 RepID=C0N6J0_9GAMM
type I secretion outer membrane protein, TolC precursor
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
PLM3_127_b2_sep16_scaffold_6980_3
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1347..2621)
DNA (1275bp) protein (425aa)
3-deoxy-D-manno-octulosonic-acid transferase Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YAN8_THIV6
3-deoxy-D-manno-octulosonic-acid transferase
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:AFL74056.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
PLM3_127_b2_sep16_scaffold_6980_4
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2618..3397)
DNA (780bp) protein (260aa)
Lipopolysaccharide kinase (Fragment) Tax=mine drainage metagenome RepID=T0XYN1_9ZZZZ
3-deoxy-D-manno-octulosonic acid kinase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
PLM3_127_b2_sep16_scaffold_6980_5

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3407..4486
DNA (1080bp) protein (360aa)
hypothetical protein Tax=Thioalkalivibrio RepID=UPI000368C6D9
Glycosyl transferase family protein {ECO:0000313|EMBL:EQD63245.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
glycosyl transferase family 9
PLM3_127_b2_sep16_scaffold_6980_6

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4483..4878
DNA (396bp) protein (132aa)
Uncharacterized protein (Fragment) Tax=mine drainage metagenome RepID=T1CAM0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD62649.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_6980_7

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comp(4882..5088)
DNA (207bp) protein (69aa)
Zinc finger, CHCC-type domain protein (Fragment) Tax=mine drainage metagenome RepID=T1CC65_9ZZZZ
Zinc finger, CHCC-type domain protein {ECO:0000313|EMBL:EQD79892.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_6980_8
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5146..7821)
DNA (2676bp) protein (892aa)
(glutamate--ammonia-ligase) adenylyltransferase (EC:2.7.7.42)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
Glutamate-ammonia-ligase adenylyltransferase Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A549_ALKEH
PLM3_127_b2_sep16_scaffold_6980_9

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comp(8122..8334)
DNA (213bp) protein (71aa)
Chaperonin GroL (Fragment) Tax=mine drainage metagenome RepID=T1BKW9_9ZZZZ
Chaperonin GroL {ECO:0000313|EMBL:EQD70442.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
60 kDa chaperonin
Displaying 9 items

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