ggKbase home page

PLM3_127_b2_sep16_scaffold_17147_5

Organism: PLM3_127_b2_sep16_Gammaproteobacteria_64_8

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(3128..3682)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BYB7_NITHN similarity UNIREF
DB: UNIREF100
  • Identity: 44.2
  • Coverage: 163.0
  • Bit_score: 146
  • Evalue 2.00e-32
Uncharacterized protein {ECO:0000313|EMBL:AKH20264.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 161.0
  • Bit_score: 152
  • Evalue 3.90e-34
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 163.0
  • Bit_score: 146
  • Evalue 5.70e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sedimenticola sp. SIP-G1 → Sedimenticola → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
GTGAACGCCCCTGGCTCCGGACGAGCCGCGTCTCAATGGCTGCCGATCGGCCGGATCGTCGGCGTGTTTGGCATCAAGGGCTGGGTCAAGGTCCAGTCCTACACGGACCCTCGCGAAGCAGTTCTCAACTACGGCGTCTGGCACCTGGATCGGCCCGCAGGTGGCGCAGCGCGGCGGGTACTGACCGGGAGGCCGCATGGGCGCCTGGTCGTGGCGAACCTCGAACAGATTGAAGACCCCGACGCGGCGCGAACGCTGGTCGGGGCGACGATTGCGGTCCAGCGGGCGCAATTGCCGGAGCTGAAAGCGCGGCAGTATTACCGCACTGACCTGATCGGGATGCGGGTGGTGGATGCGAAGGGACGCGAGCTGGGACGAGTGGATTACTTCATCGACGCGCCGGCCCATCCAGTGATGATCGTGCGCGGGGCGCAGGAACACTGGTTGCCGGCAACGCCGCAACACCTGCGCCGGGTGGATCTCGAGGCCGGTGAGATCCATGTCGATTGGGATCCGGCCGAGGAACAGGACCCCGGTGCCACGCCTCCACTTTGA
PROTEIN sequence
Length: 185
VNAPGSGRAASQWLPIGRIVGVFGIKGWVKVQSYTDPREAVLNYGVWHLDRPAGGAARRVLTGRPHGRLVVANLEQIEDPDAARTLVGATIAVQRAQLPELKARQYYRTDLIGMRVVDAKGRELGRVDYFIDAPAHPVMIVRGAQEHWLPATPQHLRRVDLEAGEIHVDWDPAEEQDPGATPPL*