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PLM3_127_b2_sep16_scaffold_17147

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_17147_1
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(3..800)
DNA (798bp) protein (266aa)
sppA; signal peptide peptidase SppA, 67K type (EC:3.4.-.-)
endopeptidase IV Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E9C9E8
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3_127_b2_sep16_scaffold_17147_2
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(833..1945)
DNA (1113bp) protein (371aa)
Glucose/sorbosone dehydrogenase-like protein Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7ADG1_GEOSK
glucose/sorbosone dehydrogenase-like protein
Sorbosone dehydrogenase {ECO:0000313|EMBL:KIE43874.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
PLM3_127_b2_sep16_scaffold_17147_3

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comp(1991..2335)
DNA (345bp) protein (115aa)
Ribosomal protein L19 Tax=mine drainage metagenome RepID=T1AK69_9ZZZZ
Ribosomal protein L19 {ECO:0000313|EMBL:EQD41129.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
50S ribosomal protein L19
PLM3_127_b2_sep16_scaffold_17147_4
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2386..3147)
DNA (762bp) protein (254aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase Tax=Edwardsiella tarda RepID=D4F1F1_EDWTA
tRNA (Guanine-N1)-methyltransferase {ECO:0000313|EMBL:AKH20263.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
PLM3_127_b2_sep16_scaffold_17147_5
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3128..3682)
DNA (555bp) protein (185aa)
Ribosome maturation factor RimM Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BYB7_NITHN
Uncharacterized protein {ECO:0000313|EMBL:AKH20264.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
16S rRNA processing protein RimM
PLM3_127_b2_sep16_scaffold_17147_6
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3707..3958)
DNA (252bp) protein (84aa)
30S ribosomal protein S16 Tax=Thioalkalivibrio RepID=UPI0003615A44
30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
PLM3_127_b2_sep16_scaffold_17147_7
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3995..4651)
DNA (657bp) protein (219aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003666927
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF46516.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
PLM3_127_b2_sep16_scaffold_17147_8
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4746..6083)
DNA (1338bp) protein (446aa)
Signal recognition particle protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BYB5_NITHN
signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
PLM3_127_b2_sep16_scaffold_17147_9
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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6116..7498
DNA (1383bp) protein (461aa)
Gluconokinase protein Tax=Salinisphaera shabanensis E1L3A RepID=U2FXQ1_9GAMM
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
PLM3_127_b2_sep16_scaffold_17147_10
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7467..8567)
DNA (1101bp) protein (367aa)
DNA repair protein radA Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BC25_9GAMM
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
DNA repair protein RadA
PLM3_127_b2_sep16_scaffold_17147_11
unknown

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8818..8943
DNA (126bp) protein (42aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_17147_12
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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9077..9973
DNA (897bp) protein (299aa)
serine/threonine protein kinase Tax=Methyloversatilis universalis RepID=UPI000374A63D
serine/threonine protein kinase with Chase2 sensor
Serine/threonine protein kinase with Chase2 sensor {ECO:0000313|EMBL:EGK71065.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
PLM3_127_b2_sep16_scaffold_17147_13

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9981..10808
DNA (828bp) protein (276aa)
protein serine/threonine phosphatase (EC:3.1.3.16)
Protein serine/threonine phosphatase Tax=mine drainage metagenome RepID=T0Y713_9ZZZZ
Protein serine/threonine phosphatase {ECO:0000313|EMBL:EQD30916.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PLM3_127_b2_sep16_scaffold_17147_14
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10827..11543
DNA (717bp) protein (239aa)
Putative uncharacterized protein Tax=gamma proteobacterium HTCC5015 RepID=B5JWX1_9GAMM
FHA domain-containing protein
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
PLM3_127_b2_sep16_scaffold_17147_15
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11641..12210)
DNA (570bp) protein (190aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
Alanine racemase Tax=Methylomonas methanica (strain MC09) RepID=F9ZZB2_METMM
PLM3_127_b2_sep16_scaffold_17147_16
unknown

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12350..12733
DNA (384bp) protein (128aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_17147_17
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12694..13611)
DNA (918bp) protein (306aa)
Replicative DNA helicase Tax=Methylophaga thiooxydans DMS010 RepID=C0N8E1_9GAMM
Replicative DNA helicase {ECO:0000313|EMBL:KFZ89868.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
replicative DNA helicase
Displaying 17 items

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