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PLM3_127_b2_sep16_scaffold_28806

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_28806_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2..361)
DNA (360bp) protein (120aa)
Oxidoreductase domain protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIU1_NIAKG
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AEV96435.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_127_b2_sep16_scaffold_28806_2
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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544..1980
DNA (1437bp) protein (479aa)
Pentapeptide repeat protein Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HR38_CYAP4
pentapeptide repeat-containing protein
Pentapeptide repeat protein {ECO:0000313|EMBL:ACL47546.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
PLM3_127_b2_sep16_scaffold_28806_3
unknown

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comp(2124..2321)
DNA (198bp) protein (66aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_28806_4
R_Nitrospirae_40_19, Nitrospirae, Bacteria

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comp(2582..3697)
DNA (1116bp) protein (372aa)
Calcium/proton exchanger Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60CG4_METCA bin=16ft_combo_ws3_JS1 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
cax-1; calcium/proton exchanger
Tax=RIFCSPHIGHO2_02_FULL_Nitrospirae_40_19_curated
PLM3_127_b2_sep16_scaffold_28806_5
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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3994..4512
DNA (519bp) protein (173aa)
Uncharacterized protein Tax=Blastopirellula marina DSM 3645 RepID=A3ZT57_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EAQ80192.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_28806_6
unknown

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comp(4421..4930)
DNA (510bp) protein (170aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_28806_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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5062..5763
DNA (702bp) protein (234aa)
RNA polymerase sigma-24 subunit RpoE Tax=Firmicutes bacterium CAG:102 RepID=R5AMX0_9FIRM
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CDM66179.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
putative RNA polymerase ECF-type sigma factor
PLM3_127_b2_sep16_scaffold_28806_8
unknown

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5760..6554
DNA (795bp) protein (265aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_28806_9
unknown

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6624..6914
DNA (291bp) protein (97aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_28806_10
Paxillus involutus, Paxillus, Boletales, Agaricomycetidae, Basidiomycota, Fungi

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6886..7443
DNA (558bp) protein (186aa)
Unplaced genomic scaffold PAXINscaffold_78, whole genome shotgun sequence {ECO:0000313|EMBL:KIJ10660.1}; species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Boletales; Paxilineae; Paxillaceae; Paxillus.;" source="Paxillus involutus ATCC 200175.;"
sucB; putative dihydrolipoamide S-succinyltransferase
Displaying 10 items

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