ggKbase home page

PLM3_127_b2_sep16_scaffold_6708

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_6708_1
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..688)
DNA (687bp) protein (229aa)
Uncharacterised conserved protein UCP016719 Tax=Planctomyces maris DSM 8797 RepID=A6C9U6_9PLAN
beta-lactamase, putative
Beta-lactamase, putative {ECO:0000313|EMBL:CDF84415.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13).;"
PLM3_127_b2_sep16_scaffold_6708_2
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(757..1203)
DNA (447bp) protein (149aa)
Anti-sigma factor antagonist Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIB5_CHLTF
anti-anti-sigma factor
Tax=GWB2_Ignavibacteria_35_6b_curated
PLM3_127_b2_sep16_scaffold_6708_3
R_OP3X_45_16, OP3X, Bacteria

Not on your lists

comp(1480..2202)
DNA (723bp) protein (241aa)
Uncharacterized protein Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GID1_CALEA
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
PLM3_127_b2_sep16_scaffold_6708_4
unknown

Not on your lists

2242..2418
DNA (177bp) protein (59aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6708_5
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

comp(2348..2758)
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GID1_CALEA
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
PLM3_127_b2_sep16_scaffold_6708_6
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(3309..4133)
DNA (825bp) protein (275aa)
Probable dual-specificity RNA methyltransferase RlmN Tax=Solibacter usitatus (strain Ellin6076) RepID=RLMN_SOLUE
radical SAM protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3_127_b2_sep16_scaffold_6708_7
unknown

Not on your lists

comp(4339..4839)
DNA (501bp) protein (167aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6708_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(4892..5362)
DNA (471bp) protein (157aa)
fliS; flagellar protein; K02422 flagellar protein FliS bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
fliS; flagellin-specific chaperone FliS
Flagellin-specific chaperone FliS {ECO:0000313|EMBL:CBK42055.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_127_b2_sep16_scaffold_6708_9
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5401..6759)
DNA (1359bp) protein (453aa)
flagellar hook-associated 2 domain-containing protein; K02407 flagellar hook-associated protein 2 bin=CNBR_ACIDO species=Uliginosibacterium gangwonense genus=Uliginosibacterium taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Flagellar cap protein FliD {ECO:0000313|EMBL:ETM66344.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
fliD; flagellar hook-associated protein 2
PLM3_127_b2_sep16_scaffold_6708_10
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6857..7240)
DNA (384bp) protein (128aa)
Putative uncharacterized protein Tax=Methyloversatilis universalis FAM5 RepID=F5R7V5_9RHOO
Flagellar protein FlaG {ECO:0000313|EMBL:EXI77638.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
flagellar protein FlaG protein
PLM3_127_b2_sep16_scaffold_6708_11
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(7370..8173)
DNA (804bp) protein (268aa)
fliC; flagellin FliC; K02406 flagellin bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
flagellin
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_127_b2_sep16_scaffold_6708_12
unknown

Not on your lists

comp(8880..9398)
DNA (519bp) protein (173aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6708_13
Tetrahymena thermophila, Tetrahymena, Hymenostomatida, Oligohymenophorea, Eukaryota

Not on your lists

9481..10323
DNA (843bp) protein (281aa)
hypothetical protein, partial Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000368CD9C
SLEI family protein {ECO:0000313|EMBL:EAR82404.1}; species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Hymenostomatida; Tetrahymenina; Tetrahymenidae; Tetrahymena.;" source="Tetrahymena thermophila (strain SB210).;"
tetratricopeptide repeat protein
PLM3_127_b2_sep16_scaffold_6708_14
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10350..11504
DNA (1155bp) protein (385aa)
Glycosyl transferase family 2 Tax=Geobacter sp. (strain M21) RepID=C6E7I0_GEOSM
family 2 glycosyl transferase
Tax=GWC2_Geobacteraceae_58_44_curated
Displaying 14 items

View Taxonomy