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PLM3_127_b2_sep16_scaffold_12724

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_12724_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(2..415)
DNA (414bp) protein (138aa)
Lactate dehydrogenase-like oxidoreductase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLE7_SINAD
lactate dehydrogenase-like oxidoreductase
Lactate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:AGA30067.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3_127_b2_sep16_scaffold_12724_2
RLO_RIF05_58_11, RIF5, Bacteria

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comp(708..1661)
DNA (954bp) protein (318aa)
iunH; inosine-uridine preferring nucleoside hydrolase (EC:3.2.2.1)
inosine-uridine preferring nucleoside hydrolase Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B74D6B
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
PLM3_127_b2_sep16_scaffold_12724_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(1980..2240)
DNA (261bp) protein (87aa)
HIT family hydrolase Tax=Sorangium cellulosum So0157-2 RepID=S4Y499_SORCE
HIT family hydrolase, diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:CDM64534.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
HIT family hydrolase
PLM3_127_b2_sep16_scaffold_12724_4
unknown

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comp(3077..3316)
DNA (240bp) protein (80aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_12724_5
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3531..4193)
DNA (663bp) protein (221aa)
Putative phosphoribosyltransferase Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z2X0_METPS
putative phosphoribosyltransferase
Putative phosphoribosyltransferase {ECO:0000313|EMBL:BAI63042.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
PLM3_127_b2_sep16_scaffold_12724_6
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4183..4590)
DNA (408bp) protein (136aa)
CoA-binding protein Tax=Thauera sp. 63 RepID=N6X2I4_9RHOO
CoA-binding protein
Tax=BJP_IG2103_Rhodocyclales_63_50
PLM3_127_b2_sep16_scaffold_12724_7
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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comp(4761..5483)
DNA (723bp) protein (241aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
Pseudouridine synthase Tax=uncultured Acidobacteria bacterium RepID=Q7X2Z6_9BACT
pseudouridine synthase
PLM3_127_b2_sep16_scaffold_12724_8
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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comp(5480..6394)
DNA (915bp) protein (305aa)
Condensin subunit ScpB Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SF6_SOLUE
condensin subunit ScpB
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3_127_b2_sep16_scaffold_12724_9
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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comp(6586..8235)
DNA (1650bp) protein (550aa)
Tryptophan--tRNA ligase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJU0_KORVE
tryptophanyl-tRNA synthetase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3_127_b2_sep16_scaffold_12724_10

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comp(8529..9173)
DNA (645bp) protein (215aa)
Zn-dependent protease Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJW0_CHLTF
Zn-dependent protease
Uncharacterized protein {ECO:0000313|EMBL:KKN52967.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3_127_b2_sep16_scaffold_12724_11

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comp(9559..10533)
DNA (975bp) protein (325aa)
Xylose isomerase domain-containing protein TIM barrel Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EGC0_RUNSL
Marine sediment metagenome DNA, contig: S01H1_S14131 {ECO:0000313|EMBL:GAF99842.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
xylose isomerase domain-containing protein
Displaying 11 items

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