ggKbase home page

PLM3_127_b2_sep16_scaffold_7534

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_7534_1
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(312..1304)
DNA (993bp) protein (331aa)
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase Tax=Sulfobacillus acidophilus RepID=F8I590_SULAT
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3_127_b2_sep16_scaffold_7534_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(1301..2419)
DNA (1119bp) protein (373aa)
histidinol-phosphate aminotransferase (EC:2.6.1.9)
histidinol-phosphate aminotransferase Tax=Thioalkalivibrio sp. ALE30 RepID=UPI00035E9E09
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3_127_b2_sep16_scaffold_7534_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(2416..3300)
DNA (885bp) protein (295aa)
ribosomal large subunit pseudouridine synthase B; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rluB; 23S rRNA pseudouridylate synthase B (EC:4.2.1.70)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_127_b2_sep16_scaffold_7534_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(3338..4228)
DNA (891bp) protein (297aa)
Putative uncharacterized protein Tax=uncultured marine bacterium 105 RepID=Q6SI35_9BACT
chromosome segregation and condensation protein ScpB
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3_127_b2_sep16_scaffold_7534_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(4247..5068)
DNA (822bp) protein (274aa)
scpA; chromosome segregation and condensation protein ScpA; K05896 segregation and condensation protein A bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
scpA; chromosome segregation and condensation protein ScpA
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3_127_b2_sep16_scaffold_7534_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(5065..6063)
DNA (999bp) protein (333aa)
trpS; tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3_127_b2_sep16_scaffold_7534_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(6071..6724)
DNA (654bp) protein (218aa)
M50B family peptidase (EC:3.4.24.-)
Membrane protein, putative Tax=uncultured marine bacterium 105 RepID=Q6SI32_9BACT
Tax=RBG_16_Acidobacteria_70_10_curated
Displaying 7 items

View Taxonomy