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PLM3_127_b2_sep16_scaffold_13435

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_13435_1
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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comp(1..882)
DNA (882bp) protein (294aa)
Mannose-1-phosphate guanylyltransferase (GDP) {ECO:0000313|EMBL:ABX07451.1}; EC=2.7.7.22 {ECO:0000313|EMBL:ABX07451.1};; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
Mannose-1-phosphate guanylyltransferase (GDP) Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B2A1_HERA2
mannose-1-phosphate guanylyltransferase
PLM3_127_b2_sep16_scaffold_13435_2
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(911..2023)
DNA (1113bp) protein (371aa)
dev:DhcVS_625 Rossmann fold DNA uptake nucleotide-binding protein; K04096 DNA processing protein bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
putative DNA processing protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_13435_3
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2226..2801)
DNA (576bp) protein (192aa)
Ribosome maturation factor RimM Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN73_9FIRM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
rimM; ribosome maturation factor RimM
PLM3_127_b2_sep16_scaffold_13435_4
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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comp(2802..3041)
DNA (240bp) protein (80aa)
UPF0109 protein Cbei_1177 Tax=Clostridium RepID=A6LSM9_CLOB8
hypothetical protein
Tax=RBG_16_Chloroflexi_56_8_curated
PLM3_127_b2_sep16_scaffold_13435_5
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(3337..3609)
DNA (273bp) protein (91aa)
30S ribosomal protein S16 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N5B6_ANATU
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
PLM3_127_b2_sep16_scaffold_13435_6
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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comp(3761..4702)
DNA (942bp) protein (314aa)
Signal recognition particle protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I986_CALAS
ffh; signal recognition particle protein
Tax=CG_Anaero_02
PLM3_127_b2_sep16_scaffold_13435_7
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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comp(4726..5049)
DNA (324bp) protein (108aa)
Suspect SCG annotation. See neighboring gene [PLM3_127_b2_sep16_scaffold_13435_6].
Signal recognition particle protein bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
ffh; signal recognition particle protein
Tax=CG_Anaero_02
PLM3_127_b2_sep16_scaffold_13435_8
unknown

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comp(5209..5319)
DNA (111bp) protein (37aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_13435_9
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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5389..6771
DNA (1383bp) protein (461aa)
Putative LysR family transcriptional regulator Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I915_CALAS
putative LysR family transcriptional regulator
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:BAM01753.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3_127_b2_sep16_scaffold_13435_10
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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6840..7751
DNA (912bp) protein (304aa)
Dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase bin=GWC2_Chloroflexi_49_37 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
Tax=CG_Anaero_03
PLM3_127_b2_sep16_scaffold_13435_11
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

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comp(7797..8294)
DNA (498bp) protein (166aa)
7, 8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZBZ4_AZOL4
folK; 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase
Tax=RBG_16_Chloroflexi_57_9_curated
PLM3_127_b2_sep16_scaffold_13435_12
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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8474..9370
DNA (897bp) protein (299aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Glutamine--scyllo-inositol transaminase {ECO:0000313|EMBL:ACL24862.1}; EC=2.6.1.50 {ECO:0000313|EMBL:ACL24862.1};; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
Glutamine--scyllo-inositol transaminase Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GBP5_CHLAD
Displaying 12 items

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