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PLM3_127_b2_sep16_scaffold_2518

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2518_1
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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3..572
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I8I1_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM01569.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3_127_b2_sep16_scaffold_2518_trna_4
unknown

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comp(636..707)
DNA (72bp)
transferRNA Gly
PLM3_127_b2_sep16_scaffold_2518_trna_3
unknown

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comp(712..784)
DNA (73bp)
transferRNA Trp
PLM3_127_b2_sep16_scaffold_2518_trna_2
unknown

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comp(856..927)
DNA (72bp)
transferRNA Met
PLM3_127_b2_sep16_scaffold_2518_trna_1
unknown

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comp(1442..1514)
DNA (73bp)
transferRNA Arg
PLM3_127_b2_sep16_scaffold_2518_2
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(1677..2678)
DNA (1002bp) protein (334aa)
PfkB domain protein Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UGP1_SINMW
ribokinase
Tax=BJP_IG2069_Anaerolineales_43_63
PLM3_127_b2_sep16_scaffold_2518_3
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(2772..4097)
DNA (1326bp) protein (442aa)
GAF sensor signal transduction histidine kinase bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
gaf sensor signal transduction histidine kinase
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3_127_b2_sep16_scaffold_2518_4
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(4407..5282)
DNA (876bp) protein (292aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4ECY7_9CHLR
putative hemolysin
Tax=RBG_16_Chloroflexi_57_9_curated
PLM3_127_b2_sep16_scaffold_2518_5
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

5456..6325
DNA (870bp) protein (290aa)
Putative prenyltransferase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N5A5_ANATU
putative prenyltransferase
Tax=CG_Anaero_02
PLM3_127_b2_sep16_scaffold_2518_6
Thermoflexus hugenholtzii, Thermoflexus, Thermoflexales, Thermoflexia, Chloroflexi, Bacteria

Not on your lists


comp(6556..6954)
DNA (399bp) protein (133aa)
30S ribosomal protein S9 Tax=bacterium JAD2 RepID=S4X364_9CHLR
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; species="Bacteria; Chloroflexi; Thermoflexia; Thermoflexales; Thermoflexaceae; Thermoflexus.;" source="Thermoflexus hugenholtzii JAD2.;"
30S ribosomal protein S9
PLM3_127_b2_sep16_scaffold_2518_7
Spirochaeta sp. JC230, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists


comp(6997..7425)
DNA (429bp) protein (143aa)
50S ribosomal protein L13 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7UGK4_9DELT
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC230.;"
50S ribosomal protein L13
PLM3_127_b2_sep16_scaffold_2518_8
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(7455..8207)
DNA (753bp) protein (251aa)
tRNA pseudouridine synthase A Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C033_DESTA
pseudouridylate synthase I
Tax=CG_Anaero_02
PLM3_127_b2_sep16_scaffold_2518_9
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8237..8596)
DNA (360bp) protein (120aa)
50S ribosomal protein L17 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
rplQ; 50S ribosomal protein L17
Tax=GWD2_Desulfuromonadales_54_10_curated
PLM3_127_b2_sep16_scaffold_2518_10
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(8640..9623)
DNA (984bp) protein (328aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
DNA-directed RNA polymerase subunit alpha Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZI5_CALAS
rpoA; DNA-directed RNA polymerase subunit alpha
PLM3_127_b2_sep16_scaffold_2518_11
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists


comp(9733..10368)
DNA (636bp) protein (212aa)
30S ribosomal protein S4 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZI6_CALAS
rpsD; 30S ribosomal protein S4
Tax=RBG_16_Chloroflexi_57_9_curated
PLM3_127_b2_sep16_scaffold_2518_12
Thermovirga lienii, Thermovirga, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists


comp(10567..10935)
DNA (369bp) protein (123aa)
30S ribosomal protein S11 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V8W7_THELD
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermovirga.;" source="Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314).;"
PLM3_127_b2_sep16_scaffold_2518_13
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists


comp(11078..11458)
DNA (381bp) protein (127aa)
30S ribosomal protein S13 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THC0_9CHLR
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
rpsM; 30S ribosomal protein S13
PLM3_127_b2_sep16_scaffold_2518_14
RBG_19FT_COMBO_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(11671..12492)
DNA (822bp) protein (274aa)
map; methionine aminopeptidase (EC:3.4.11.18)
methionine aminopeptidase Tax=Alicyclobacillus pohliae RepID=UPI00037DAA45
Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated
PLM3_127_b2_sep16_scaffold_2518_15
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists


comp(12543..13868)
DNA (1326bp) protein (442aa)
Protein translocase subunit SecY Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZJ2_CALAS
secY; preprotein translocase subunit SecY
Tax=RBG_16_Chloroflexi_56_8_curated
PLM3_127_b2_sep16_scaffold_2518_16
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13955..14413)
DNA (459bp) protein (153aa)
50S ribosomal protein L15 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=RL15_THETN
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000255|HAMAP-Rule:MF_01341}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 /; JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis).;"
PLM3_127_b2_sep16_scaffold_2518_17
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists


comp(14444..14638)
DNA (195bp) protein (65aa)
50S ribosomal protein L30 Tax=Rhodothermus marinus RepID=D0MGX2_RHOM4
50S ribosomal protein L30
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3_127_b2_sep16_scaffold_2518_18
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


comp(14631..15164)
DNA (534bp) protein (178aa)
30S ribosomal protein S5 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZJ5_CALAS
rpsE; 30S ribosomal protein S5
Tax=CG_Anaero_02
PLM3_127_b2_sep16_scaffold_2518_19
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists


comp(15202..15576)
DNA (375bp) protein (125aa)
50S ribosomal protein L18 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=RL18_CHLAD
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000255|HAMAP-Rule:MF_01337}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
PLM3_127_b2_sep16_scaffold_2518_20
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists


comp(15603..16148)
DNA (546bp) protein (182aa)
50S ribosomal protein L6 Tax=Leptolyngbya sp. Heron Island J RepID=U9W155_9CYAN
rplF; 50S ribosomal protein L6
Tax=RBG_16_Chloroflexi_57_9_curated
PLM3_127_b2_sep16_scaffold_2518_21
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists


comp(16188..16592)
DNA (405bp) protein (135aa)
30S ribosomal protein S8 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3N8_ANATU
rpsH; 30S ribosomal protein S8
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3_127_b2_sep16_scaffold_2518_22
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


comp(16710..16892)
DNA (183bp) protein (61aa)
30S ribosomal protein S14 type Z Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3N7_ANATU
rpsN; 30S ribosomal protein S14
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3_127_b2_sep16_scaffold_2518_23
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists


comp(16900..17439)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZK0_CALAS
rplE; 50S ribosomal protein L5
Tax=RBG_16_Chloroflexi_57_9_curated
PLM3_127_b2_sep16_scaffold_2518_24
Fervidobacterium nodosum, Fervidobacterium, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists


comp(17466..17834)
DNA (369bp) protein (123aa)
50S ribosomal protein L24 Tax=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) RepID=RL24_FERNB
rplX; 50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000255|HAMAP-Rule:MF_01326}; species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Fervidobacterium.;" source="Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1).;"
PLM3_127_b2_sep16_scaffold_2518_25
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


comp(17874..18245)
DNA (372bp) protein (124aa)
50S ribosomal protein L14 Tax=Thermincola potens (strain JR) RepID=D5XA93_THEPJ
50S ribosomal protein L14
Tax=CG_Anaero_02
PLM3_127_b2_sep16_scaffold_2518_26
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(18291..18548)
DNA (258bp) protein (86aa)
30S ribosomal protein S17 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1Y7G9_ANEAE
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus migulanus (Bacillus migulanus).;"
30S ribosomal protein S17
Displaying items 1-30 of 41 in total

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