ggKbase home page

PLM3_127_b2_sep16_scaffold_3605

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_3605_1
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(2..457)
DNA (456bp) protein (152aa)
Luciferase-like monooxygenase Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G500_CHLAD
luciferase-like monooxygenase
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3_127_b2_sep16_scaffold_3605_2
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(597..977)
DNA (381bp) protein (127aa)
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3_127_b2_sep16_scaffold_3605_3
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1144..2745)
DNA (1602bp) protein (534aa)
Phytoene dehydrogenase-like oxidoreductase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DI34_SINAD
phytoene dehydrogenase-like oxidoreductase
Phytoene dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:AGA29054.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3_127_b2_sep16_scaffold_3605_4
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2969..3358)
DNA (390bp) protein (130aa)
RNP-1 like RNA-binding protein bin=GWF2_Lentisphaerae_50_93 species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
RNP-1 like RNA-binding protein
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
PLM3_127_b2_sep16_scaffold_3605_5
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(3783..4979)
DNA (1197bp) protein (399aa)
Peptidase C45 family protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I8K5_CALAS
peptidase C45 family protein
Peptidase C45 family protein {ECO:0000313|EMBL:BAM01593.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3_127_b2_sep16_scaffold_3605_6
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(5310..6605)
DNA (1296bp) protein (432aa)
hemA; glutamyl-tRNA reductase (GluTR) (EC:1.2.1.70)
Glutamyl-tRNA reductase bin=GWC2_Pelobacter_58_13 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
PLM3_127_b2_sep16_scaffold_3605_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6827..8053)
DNA (1227bp) protein (409aa)
Molybdenum cofactor synthesis domain protein Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G9U7_CHLAD
Uncharacterized protein {ECO:0000313|EMBL:ETX01470.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
molybdenum cofactor synthesis domain-containing protein
PLM3_127_b2_sep16_scaffold_3605_8
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8324..9880)
DNA (1557bp) protein (519aa)
6-aminohexanoate-dimer hydrolase {ECO:0000313|EMBL:AKB25220.1}; EC=3.5.1.46 {ECO:0000313|EMBL:AKB25220.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. MTP4.;"
6-aminohexanoate-dimer hydrolase (EC:3.5.1.46)
Putative 6-aminohexanoate-dimer hydrolase Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PSC2_METMA
PLM3_127_b2_sep16_scaffold_3605_9

Not on your lists

comp(10005..10202)
DNA (198bp) protein (66aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YHZ7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KKK82593.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sensor protein
PLM3_127_b2_sep16_scaffold_3605_10
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(10171..11211)
DNA (1041bp) protein (347aa)
PAS/PAC sensor hybrid histidine kinase Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FI33_DESAA
PAS/PAC sensor hybrid histidine kinase
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM3_127_b2_sep16_scaffold_3605_11
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11664..12533)
DNA (870bp) protein (290aa)
MCP methyltransferase/methylesterase Tax=planctomycete KSU-1 RepID=I3IN73_9PLAN
methylase of chemotaxis methyl-accepting protein
Tax=CG_Syntroph_02
Displaying 11 items

View Taxonomy