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PLM3_127_b2_sep16_scaffold_3794

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_3794_1
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1..1578)
DNA (1578bp) protein (526aa)
Uncharacterized protein Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BZM8_METCG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB67848.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC; 103675 / OCM 69 / GP-6) (Methanothrix concilii).;"
PLM3_127_b2_sep16_scaffold_3794_trna_1
unknown

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comp(1903..1975)
DNA (73bp)
transferRNA Met
PLM3_127_b2_sep16_scaffold_3794_2
R_OD1_Magasanikbacteria_50_9b, Magasanikbacteria, Parcubacteria, Bacteria

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comp(2123..2548)
DNA (426bp) protein (142aa)
septum formation initiator bin=bin9_gal15 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_50_9b_curated
PLM3_127_b2_sep16_scaffold_3794_3
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

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comp(2787..3443)
DNA (657bp) protein (219aa)
hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_57_9_curated
PLM3_127_b2_sep16_scaffold_3794_4
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

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3577..4446
DNA (870bp) protein (290aa)
Putative uncharacterized protein bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
protein kinase
Tax=GWB2_Chloroflexi_54_36_curated
PLM3_127_b2_sep16_scaffold_3794_5
unknown

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comp(4322..4642)
DNA (321bp) protein (107aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3794_6
RBG_19FT_COMBO_Chloroflexi_47_9_curated, Chloroflexi, Bacteria

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comp(4755..7739)
DNA (2985bp) protein (995aa)
glycosidase (EC:3.2.1.-)
Glycosidase bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=RBG_19FT_COMBO_Chloroflexi_47_9_curated
PLM3_127_b2_sep16_scaffold_3794_7
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

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comp(7823..8536)
DNA (714bp) protein (238aa)
Ribosomal RNA small subunit methyltransferase G Tax=uncultured Chloroflexi bacterium RepID=Q2Z016_9CHLR
rsmG; ribosomal RNA small subunit methyltransferase G
Tax=RBG_13_Chloroflexi_66_10_curated
PLM3_127_b2_sep16_scaffold_3794_8
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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comp(8549..9469)
DNA (921bp) protein (307aa)
rnz; ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3_127_b2_sep16_scaffold_3794_9
unknown

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9703..9867
DNA (165bp) protein (55aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3794_10
unknown

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comp(9864..10256)
DNA (393bp) protein (131aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3794_11
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

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comp(10253..10750)
DNA (498bp) protein (166aa)
Tax=RBG_16_Zixibacteria_50_21_curated
PLM3_127_b2_sep16_scaffold_3794_12
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10795..11280)
DNA (486bp) protein (162aa)
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
Integral membrane sensor signal transduction histidine kinase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GFK2_GEOUR
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
PLM3_127_b2_sep16_scaffold_3794_13
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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comp(11288..12967)
DNA (1680bp) protein (560aa)
Multi-sensor hybrid histidine kinase Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AXH1_HERA2
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ABX06891.1}; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
PLM3_127_b2_sep16_scaffold_3794_14
unknown

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13221..13460
DNA (240bp) protein (80aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3794_15
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(13670..14395)
DNA (726bp) protein (242aa)
OmpR subfamily Tax=Oscillochloris trichoides DG-6 RepID=E1IGU9_9CHLR
two component transcriptional regulator, winged helix family
Tax=RBG_13_Chloroflexi_56_8_curated
PLM3_127_b2_sep16_scaffold_3794_16
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

14804..15505
DNA (702bp) protein (234aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037BB139
peptidase S16 lon domain-containing protein
Tax=RBG_16_Chloroflexi_54_18_curated
PLM3_127_b2_sep16_scaffold_3794_17
Mycobacterium phlei, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15674..16597
DNA (924bp) protein (308aa)
RNA polymerase sigma factor Tax=Mycobacterium phlei RIVM601174 RepID=I0RWS4_MYCPH
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium phlei RIVM601174.;"
sigB; RNA polymerase sigma factor SigB
PLM3_127_b2_sep16_scaffold_3794_18
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(16650..18971)
DNA (2322bp) protein (774aa)
adenylate/guanylate cyclase bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
Displaying 19 items

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