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PLM3_127_b2_sep16_scaffold_8783

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_8783_1
Paenibacillus sp. E194, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2..532)
DNA (531bp) protein (177aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00038176B0
Uncharacterized protein {ECO:0000313|EMBL:KJB87143.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. E194.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_8783_2
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(774..1400)
DNA (627bp) protein (209aa)
Orotate phosphoribosyltransferase Tax=Saccharopolyspora erythraea RepID=A4FFZ0_SACEN
Uncharacterized protein {ECO:0000313|EMBL:KGM30949.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_8783_3
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1521..1988)
DNA (468bp) protein (156aa)
Endoribonuclease L-PSP Tax=Azospirillum amazonense Y2 RepID=G1Y2A7_9PROT
Endoribonuclease L-PSP {ECO:0000313|EMBL:EGY00348.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
putative endoribonuclease L-PSP
PLM3_127_b2_sep16_scaffold_8783_4
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(2042..2680)
DNA (639bp) protein (213aa)
Transcriptional regulator, TetR family Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TW00_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KIE12382.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
TetR family transcriptional regulator
PLM3_127_b2_sep16_scaffold_8783_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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2879..3289
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW95531.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Pyridoxamine 5'-phosphate oxidase bin=GWD2_Deltaproteobacteria_55_8 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
PLM3_127_b2_sep16_scaffold_8783_6
unknown

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3844..4320
DNA (477bp) protein (159aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_8783_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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4655..4831
DNA (177bp) protein (59aa)
NADPH-quinone reductase Tax=Mesorhizobium sp. LNJC394B00 RepID=V7GAA4_9RHIZ
Zn-dependent oxidoreductase, NADPH:quinone reductase {ECO:0000313|EMBL:CDM64159.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
NADPH-quinone reductase
PLM3_127_b2_sep16_scaffold_8783_8
Deinococcus swuensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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4871..5626
DNA (756bp) protein (252aa)
DSBA oxidoreductase Tax=Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 / NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703) RepID=F0RM96_DEIPM
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:AIZ46733.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus swuensis.;"
PLM3_127_b2_sep16_scaffold_8783_9
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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5666..6433
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AZ76_HERA2
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABX03622.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
PLM3_127_b2_sep16_scaffold_8783_10
Paenibacillus borealis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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6526..6645
DNA (120bp) protein (40aa)
short-chain dehydrogenase Tax=Paenibacillus polymyxa RepID=UPI0003015D9C
short-chain dehydrogenase
Short-chain dehydrogenase {ECO:0000313|EMBL:AIQ56871.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus borealis.;"
PLM3_127_b2_sep16_scaffold_8783_11
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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6704..7249
DNA (546bp) protein (182aa)
YceI family protein Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G9V2_CHLAD
hypothetical protein
YceI family protein {ECO:0000313|EMBL:ACL24467.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
PLM3_127_b2_sep16_scaffold_8783_12
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

7366..7776
DNA (411bp) protein (137aa)
DoxX protein Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A505_DEIPD
DoxX protein
DoxX protein {ECO:0000313|EMBL:AFZ68946.1}; Flags: Precursor;; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416; / KR-200).;"
PLM3_127_b2_sep16_scaffold_8783_13
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

7913..8578
DNA (666bp) protein (222aa)
Transcriptional regulator, TetR family Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TW00_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KIE12382.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
TetR family transcriptional regulator
PLM3_127_b2_sep16_scaffold_8783_14
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

8799..9335
DNA (537bp) protein (179aa)
DoxX Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXK4_RUBXD
DoxX
DoxX {ECO:0000313|EMBL:ABG03874.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_127_b2_sep16_scaffold_8783_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9514..10986)
DNA (1473bp) protein (491aa)
Uncharacterized protein Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHK7_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47965.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
Displaying 15 items

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