ggKbase home page

PLM3_127_b2_sep16_scaffold_3046

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_3046_1
unknown

Not on your lists

3..113
DNA (111bp) protein (37aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3046_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(323..610)
DNA (288bp) protein (96aa)
Uncharacterized protein Tax=Sorangium cellulosum (strain So ce56) RepID=A9FXC8_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95502.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
PLM3_127_b2_sep16_scaffold_3046_3
unknown

Not on your lists

1092..1256
DNA (165bp) protein (55aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3046_4
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1288..2253
DNA (966bp) protein (322aa)
Putative phage integrase Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZAE7_AZOL4
putative phage integrase
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM3_127_b2_sep16_scaffold_3046_5
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2383..3234
DNA (852bp) protein (284aa)
Chromosome partitioning protein Soj Tax=uncultured candidate division OP1 bacterium RepID=H5SSR7_9BACT
parA; Chromosome partitioning protein ParA
Tax=RBG_13_Deltaproteobacteria_58_19_curated
PLM3_127_b2_sep16_scaffold_3046_6
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

3182..3484
DNA (303bp) protein (101aa)
Hypothetical conserved protein Tax=uncultured candidate division OP1 bacterium RepID=H5SSR6_9BACT
Hypothetical conserved protein {ECO:0000313|EMBL:BAL59202.1}; species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_3046_7
unknown

Not on your lists

3911..4048
DNA (138bp) protein (46aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3046_8
unknown

Not on your lists

4480..4974
DNA (495bp) protein (165aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3046_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(5012..8440)
DNA (3429bp) protein (1143aa)
GAF domain-containing protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
GAF domain-containing protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_3046_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

8598..8891
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJ53_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28706.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3_127_b2_sep16_scaffold_3046_11

Not on your lists

8892..9263
DNA (372bp) protein (124aa)
Putative nucleic acid-binding protein Tax=Synechocystis sp. PCC 7509 RepID=L8KY41_9SYNC
Hypothetical conserved protein {ECO:0000313|EMBL:BAL54295.1}; species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
nucleic acid-binding protein, contains PIN domain
PLM3_127_b2_sep16_scaffold_3046_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9803..10561
DNA (759bp) protein (253aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_3046_13
unknown

Not on your lists

10573..10767
DNA (195bp) protein (65aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3046_14
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10691..11065)
DNA (375bp) protein (125aa)
Transposase IS200-family protein bin=GWE2_Gammaproteobacteria_37_16 species=Nitrosomonas sp. AL212 genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gammaproteobacteria_37_16 organism_group=Gammaproteobacteria organism_desc=Looks good, but small
Mobile element protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
PLM3_127_b2_sep16_scaffold_3046_15
unknown

Not on your lists

11127..11243
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 15 items

View Taxonomy