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PLM3_127_b2_sep16_scaffold_26424

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_26424_1
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..785)
DNA (783bp) protein (261aa)
clpX; ATP-dependent Clp protease ATP-binding subunit clpX (EC:3.4.21.92) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ATPase AAA {ECO:0000313|EMBL:ETW97475.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
clpX; ATP-dependent protease ATP-binding subunit ClpX
PLM3_127_b2_sep16_scaffold_26424_2
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(851..1468)
DNA (618bp) protein (206aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CP84_DESK7
PLM3_127_b2_sep16_scaffold_26424_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1507..2823)
DNA (1317bp) protein (439aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00037000C2
trigger factor Tig
PLM3_127_b2_sep16_scaffold_26424_trna_2
unknown

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comp(2871..2954)
DNA (84bp)
transferRNA Leu
PLM3_127_b2_sep16_scaffold_26424_trna_1
unknown

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comp(2959..3033)
DNA (75bp)
transferRNA Lys
PLM3_127_b2_sep16_scaffold_26424_4
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(3111..3956)
DNA (846bp) protein (282aa)
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:ACL46349.1}; EC=4.1.2.13 {ECO:0000313|EMBL:ACL46349.1};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
Ketose-bisphosphate aldolase Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HVN7_CYAP4
ketose-bisphosphate aldolase
PLM3_127_b2_sep16_scaffold_26424_5

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comp(4274..5302)
DNA (1029bp) protein (343aa)
Uncharacterized protein Tax=Oryza brachyantha RepID=J3MD20_ORYBR
Marine sediment metagenome DNA, contig: S01H1_L04592 {ECO:0000313|EMBL:GAF68521.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_26424_6
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5441..7057)
DNA (1617bp) protein (539aa)
Adenylate and Guanylate cyclase catalytic domain protein Tax=delta proteobacterium NaphS2 RepID=D8EWW8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ETX02976.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_26424_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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7433..7798
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D297_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19337.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_26424_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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7900..9144
DNA (1245bp) protein (415aa)
Acyl-CoA dehydrogenase domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3R0_CONWI
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ETW93298.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
acyl-CoA dehydrogenase
PLM3_127_b2_sep16_scaffold_26424_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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9298..9693
DNA (396bp) protein (132aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035DE936
Uncharacterized protein {ECO:0000313|EMBL:ETX04770.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_26424_10
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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9806..10186
DNA (381bp) protein (127aa)
ComE operon protein 1-related protein Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P3B5_AROAE
competence protein ComE
ComE operon protein 1-related protein {ECO:0000313|EMBL:CAI08199.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
PLM3_127_b2_sep16_scaffold_26424_11
unknown

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10294..10389
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 13 items

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