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PLM3_127_b2_sep16_scaffold_6253

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_6253_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(2..994)
DNA (993bp) protein (331aa)
acyl-CoA dehydrogenase domain-containing protein bin=bin7_NC10_sister species=Novosphingobium sp. Rr 2-17 genus=Novosphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
acyl-CoA dehydrogenase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_6253_2
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

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1228..2016
DNA (789bp) protein (263aa)
ABC transport system protein Tax=uncultured candidate division OP1 bacterium RepID=H5SUB5_9BACT
ABC transport system protein {ECO:0000313|EMBL:BAL60115.1}; species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
ABC transporter
PLM3_127_b2_sep16_scaffold_6253_3

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2021..2665
DNA (645bp) protein (215aa)
Branched-chain amino acid transport system ATP-binding protein Tax=uncultured candidate division OP1 bacterium RepID=H5SUB4_9BACT
Marine sediment metagenome DNA, contig: S01H4_C02599 {ECO:0000313|EMBL:GAG64716.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
livF; ABC transporter
PLM3_127_b2_sep16_scaffold_6253_4
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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2731..3597
DNA (867bp) protein (289aa)
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E1H0_9FIRM
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) {ECO:0000313|EMBL:CCU79740.1}; species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643.;"
Putative high-affinity branched-chain amino acid transport system permease protein LivH
PLM3_127_b2_sep16_scaffold_6253_5
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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3750..4505
DNA (756bp) protein (252aa)
Predicted protein Tax=Nematostella vectensis RepID=A7SDP3_NEMVE
HAD family hydrolase
Tax=RBG_13_Bathyarchaeota_52_12_curated
PLM3_127_b2_sep16_scaffold_6253_6
unknown

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comp(4600..4908)
DNA (309bp) protein (103aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6253_7
unknown

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comp(4921..5409)
DNA (489bp) protein (163aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6253_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5462..6310)
DNA (849bp) protein (283aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX02203.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3_127_b2_sep16_scaffold_6253_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6449..6751)
DNA (303bp) protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX02717.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein bin=bin7_NC10_sister species=Bradyrhizobium elkanii genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
membrane protein
PLM3_127_b2_sep16_scaffold_6253_10
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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7061..7252
DNA (192bp) protein (64aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3_127_b2_sep16_scaffold_6253_11
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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7368..7790
DNA (423bp) protein (141aa)
Transcriptional regulator family protein Tax=delta proteobacterium NaphS2 RepID=D8F2A6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ETX02204.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
MucR family transcriptional regulator
PLM3_127_b2_sep16_scaffold_6253_12
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8286..9452)
DNA (1167bp) protein (389aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ETX02065.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Acyl-CoA dehydrogenase bin=GWC2_Methylomirabilis_70_24 species=Streptomyces sp. e14 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Acyl-CoA dehydrogenase fadE12
PLM3_127_b2_sep16_scaffold_6253_13
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9493..9939)
DNA (447bp) protein (149aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX07591.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
nitroreductase bin=bin1_lowGC species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
ppox class F420-dependent protein
Displaying 13 items

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