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PLM3_127_b2_sep16_scaffold_4248

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4248_1
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..451)
DNA (450bp) protein (150aa)
hypothetical protein Tax=Nitrospina sp. AB-629-B18 RepID=UPI00037A0E25
Uncharacterized protein {ECO:0000313|EMBL:ETW93805.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3_127_b2_sep16_scaffold_4248_2
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(393..1139)
DNA (747bp) protein (249aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW93804.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3_127_b2_sep16_scaffold_4248_3
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1126..1545)
DNA (420bp) protein (140aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW93803.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Putative uncharacterized protein bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
PLM3_127_b2_sep16_scaffold_4248_4
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1517..2047)
DNA (531bp) protein (177aa)
Putative general secretion pathway protein Tax=Desulfococcus multivorans DSM 2059 RepID=S7TQ15_DESML
Uncharacterized protein {ECO:0000313|EMBL:ETW93802.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
general secretion pathway protein H
PLM3_127_b2_sep16_scaffold_4248_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2013..2462)
DNA (450bp) protein (150aa)
General secretion pathway protein G {ECO:0000313|EMBL:ETW93801.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
general secretion pathway protein G; K02456 general secretion pathway protein G bin=GWC2_NOV_55_46 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
general secretion pathway protein G
PLM3_127_b2_sep16_scaffold_4248_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2729..3601
DNA (873bp) protein (291aa)
PHP-like Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JW79_DESAC
Uncharacterized protein {ECO:0000313|EMBL:ETW97097.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
metal-dependent phosphoesterase, PHP family
PLM3_127_b2_sep16_scaffold_4248_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3808..5709
DNA (1902bp) protein (634aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
NADH dehydrogenase I subunit L Tax=planctomycete KSU-1 RepID=I3IPI1_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:ETW97092.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3_127_b2_sep16_scaffold_4248_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5752..7329
DNA (1578bp) protein (526aa)
NADH dehydrogenase subunit M (EC:1.6.5.3)
NADH dehydrogenase I subunit M Tax=planctomycete KSU-1 RepID=I3IPI0_9PLAN
NADH:ubiquinone oxidoreductase subunit M {ECO:0000313|EMBL:ETW97093.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3_127_b2_sep16_scaffold_4248_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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7326..7676
DNA (351bp) protein (117aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
NADH dehydrogenase I subunit A Tax=uncultured prokaryote RepID=H5SP89_9ZZZZ
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
PLM3_127_b2_sep16_scaffold_4248_10
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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7701..9398
DNA (1698bp) protein (566aa)
NADH dehydrogenase I subunit D Tax=uncultured prokaryote RepID=H5SP86_9ZZZZ
nuoD; NADH dehydrogenase I,D subunit
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
PLM3_127_b2_sep16_scaffold_4248_11
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9529..10008
DNA (480bp) protein (160aa)
NADH-quinone oxidoreductase subunit E (EC:1.6.5.3)
Uncharacterized protein {ECO:0000313|EMBL:ETW97085.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
NADH dehydrogenase I subunit E bin=GWC2_Deltaproteobacteria_66_88 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
PLM3_127_b2_sep16_scaffold_4248_12
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10239..11516
DNA (1278bp) protein (426aa)
NADH dehydrogenase subunit F {ECO:0000313|EMBL:ETW97086.1}; EC=1.6.99.5 {ECO:0000313|EMBL:ETW97086.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
nuoF; NADH-quinone oxidoreductase subunit F (NADH dehydrogenase I, chain F) (NDH-1, chain F) (EC:1.6.5.3 1.6.99.5)
NADH-quinone oxidoreductase, F subunit bin=GWB2_Proteobacteria_55_19 species=Rhizobium sp. CF122 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
PLM3_127_b2_sep16_scaffold_4248_13

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comp(11666..12454)
DNA (789bp) protein (263aa)
Predicted hydrolases or acyltransferases Tax=uncultured archaeon GZfos32E7 RepID=Q64AD0_9ARCH
Predicted hydrolases or acyltransferases {ECO:0000313|EMBL:AAU83647.1}; species="Archaea; environmental samples.;" source="uncultured archaeon GZfos32E7.;"
alpha/beta hydrolase
PLM3_127_b2_sep16_scaffold_4248_14
unknown

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comp(12480..12695)
DNA (216bp) protein (72aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4248_15
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12861..13652)
DNA (792bp) protein (264aa)
Sigma54 specific transcriptional regulator, Fis family Tax=Clostridium ultunense Esp RepID=M1Z9B8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETX01415.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
sigma-54 dependent trancsriptional regulator
PLM3_127_b2_sep16_scaffold_4248_16
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14260..15162)
DNA (903bp) protein (301aa)
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LV13_DESBD
Fis family two component sigma5-4 specific transcriptional regulator
Tax=BJP_08E140C01_Desulfomicrobium_58_14
PLM3_127_b2_sep16_scaffold_4248_17
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(15135..15476)
DNA (342bp) protein (114aa)
Transcriptional regulatory protein pilR Tax=Candidatus Nitrospira defluvii RepID=D8PBD7_9BACT
pilR; transcriptional regulatory protein pilR
Transcriptional regulatory protein pilR {ECO:0000313|EMBL:CBK40546.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_127_b2_sep16_scaffold_4248_18
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15540..16049)
DNA (510bp) protein (170aa)
Putative multi-sensor signal transduction histidine kinase Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H276_ACTM4
putative multi-sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
Displaying 18 items

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