ggKbase home page

PLM3_127_b2_sep16_scaffold_4563

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4563_1
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118..573)
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0BLM4_9BACL
DNA repair protein RadC {ECO:0000313|EMBL:ETW92387.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
DNA repair protein RadC
PLM3_127_b2_sep16_scaffold_4563_2
unknown

Not on your lists

comp(579..1622)
DNA (1044bp) protein (348aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4563_3
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1799..2104)
DNA (306bp) protein (102aa)
hypothetical protein Tax=Gluconacetobacter europaeus RepID=UPI00037FC5C0
Uncharacterized protein {ECO:0000313|EMBL:KHS49580.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
PLM3_127_b2_sep16_scaffold_4563_4
unknown

Not on your lists

comp(2101..2463)
DNA (363bp) protein (121aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4563_5
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3011..4519)
DNA (1509bp) protein (503aa)
Helicase, C-terminal Tax=Blastopirellula marina DSM 3645 RepID=A3ZP36_9PLAN
Helicase, C-terminal {ECO:0000313|EMBL:EAQ81510.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
DNA methylase
PLM3_127_b2_sep16_scaffold_4563_6
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4669..8193)
DNA (3525bp) protein (1175aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0002F8B0C9
Helicase, C-terminal {ECO:0000313|EMBL:EAQ81510.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
helicase-like
PLM3_127_b2_sep16_scaffold_4563_7
unknown

Not on your lists

8195..8758
DNA (564bp) protein (188aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4563_8
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(8565..9272)
DNA (708bp) protein (236aa)
GTP-binding protein Tax=Thioalkalivibrio RepID=UPI00036EB293
Uncharacterized protein {ECO:0000313|EMBL:CCF85392.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_4563_9
unknown

Not on your lists

comp(9430..9576)
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4563_10
unknown

Not on your lists

comp(9884..10516)
DNA (633bp) protein (211aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4563_11
unknown

Not on your lists

comp(10790..11128)
DNA (339bp) protein (113aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4563_12
unknown

Not on your lists

comp(11187..11393)
DNA (207bp) protein (69aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4563_13
unknown

Not on your lists

comp(11504..11836)
DNA (333bp) protein (111aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4563_14
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11864..12733)
DNA (870bp) protein (290aa)
Putative uncharacterized protein bin=GWB2_Clostridiales_37_7 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW14210.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM3_127_b2_sep16_scaffold_4563_15
unknown

Not on your lists

comp(13705..14166)
DNA (462bp) protein (154aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4563_16
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(14468..14818)
DNA (351bp) protein (117aa)
DNA binding domain protein, excisionase family Tax=Frankia sp. CN3 RepID=G6HIU5_9ACTO
excisionase family DNA binding domain-containing protein
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM3_127_b2_sep16_scaffold_4563_17
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15262..16197)
DNA (936bp) protein (312aa)
Uncharacterized protein {ECO:0000313|EMBL:CDH45440.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
Replication initiator protein A bin=GWC2_TM7_48_9 species=Allochromatium vinosum genus=Allochromatium taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
TrfA family protein
PLM3_127_b2_sep16_scaffold_4563_18
unknown

Not on your lists

comp(16242..16529)
DNA (288bp) protein (96aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4563_19
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16522..17121)
DNA (600bp) protein (200aa)
ParA family chromosome partitioning protein Tax=Phaeospirillum molischianum DSM 120 RepID=H8FXV5_PHAMO
ParA family chromosome partitioning protein {ECO:0000313|EMBL:CCG43193.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
plasmid partitioning protein
PLM3_127_b2_sep16_scaffold_4563_20
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17976..18386
DNA (411bp) protein (137aa)
Resolvase, N-terminal domain Tax=Nitrosomonas eutropha (strain C91) RepID=Q0ACV7_NITEC
resolvase domain-containing protein
Resolvase domain-containing protein {ECO:0000313|EMBL:GAO23399.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
PLM3_127_b2_sep16_scaffold_4563_21
R_OD1_Magasanikbacteria_44_11, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

18722..19237
DNA (516bp) protein (172aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1YKF8_9BACT
DNA polymerase V subunit
Tax=RIFCSPLOWO2_02_FULL_OD1_Magasanikbacteria_44_11_curated
PLM3_127_b2_sep16_scaffold_4563_22
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

19237..19548
DNA (312bp) protein (104aa)
nucleotidyltransferase/DNA polymerase protein; K02346 DNA polymerase IV [EC:2.7.7.7] bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
nucleotidyltransferase/DNA polymerase protein
Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
Displaying 22 items

View Taxonomy