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PLM3_127_b2_sep16_scaffold_4789

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4789_1
RLO_PLX_64_10, Bacteria

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1..789
DNA (789bp) protein (263aa)
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_127_b2_sep16_scaffold_4789_2
unknown

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comp(759..905)
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4789_3
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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1072..3057
DNA (1986bp) protein (662aa)
Ribonuclease E Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M835_GEODF
Uncharacterized protein {ECO:0000313|EMBL:ETW93577.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
ribonuclease, Rne/Rng family
PLM3_127_b2_sep16_scaffold_4789_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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3371..3628
DNA (258bp) protein (86aa)
Cupin 2, conserved barrel bin=GWD2_Deltaproteobacteria_55_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cupin 2 barrel domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_127_b2_sep16_scaffold_4789_5
Thermovirga lienii, Thermovirga, Synergistales, Synergistia, Synergistetes, Bacteria

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3670..4845
DNA (1176bp) protein (392aa)
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V5D8_THELD
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:AER65765.1}; species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermovirga.;" source="Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314).;"
PLM3_127_b2_sep16_scaffold_4789_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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4935..6305
DNA (1371bp) protein (457aa)
Threonine synthase Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1K9_9BACT
Threonine synthase {ECO:0000313|EMBL:ETW93575.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
threonine synthase
PLM3_127_b2_sep16_scaffold_4789_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6389..7711)
DNA (1323bp) protein (441aa)
hypothetical protein Tax=unclassified candidate division KSB1 RepID=UPI00036BD3F8
Inositol-3-phosphate synthase {ECO:0000313|EMBL:ETX07184.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
inositol-3-phosphate synthase
PLM3_127_b2_sep16_scaffold_4789_8

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7922..8707
DNA (786bp) protein (262aa)
Nitroreductase Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKT1_PSEUX
Uncharacterized protein {ECO:0000313|EMBL:KKL72429.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
nitroreductase
PLM3_127_b2_sep16_scaffold_4789_9
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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8737..9087
DNA (351bp) protein (117aa)
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3_127_b2_sep16_scaffold_4789_10
unknown

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comp(9156..13481)
DNA (4326bp) protein (1442aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4789_11
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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13649..14539
DNA (891bp) protein (297aa)
LysR substrate-binding Tax=Chloroflexus RepID=A9W9P6_CHLAA
LysR family transcriptional regulator
LysR substrate-binding {ECO:0000313|EMBL:ABY34532.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
PLM3_127_b2_sep16_scaffold_4789_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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14649..14912
DNA (264bp) protein (88aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW96744.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM3_127_b2_sep16_scaffold_4789_13
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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14952..15380
DNA (429bp) protein (143aa)
DSBA oxidoreductase Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S3C0_FERPA
Uncharacterized protein {ECO:0000313|EMBL:ETW94199.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
DSBA oxidoreductase
PLM3_127_b2_sep16_scaffold_4789_14
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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15358..15879
DNA (522bp) protein (174aa)
DoxX family protein Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B419A0
Uncharacterized protein {ECO:0000313|EMBL:ETW96746.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
DoxX family protein
PLM3_127_b2_sep16_scaffold_4789_15
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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15901..16674
DNA (774bp) protein (258aa)
Phosphoesterase PA-phosphatase related protein Tax=uncultured bacterium RepID=K1XAI8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETW94201.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PAP2 (acid phosphatase) superfamily protein
PLM3_127_b2_sep16_scaffold_4789_16
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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16718..17977
DNA (1260bp) protein (420aa)
Branched-chain amino acid ABC transporter Tax=Caenispirillum salinarum AK4 RepID=K9GZN5_9PROT
Putative high-affinity branched-chain amino acid transport system periplasmic-binding component LivK
Putative high-affinity branched-chain amino acid transport system periplasmic-binding component LivK {ECO:0000313|EMBL:CCQ73836.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
PLM3_127_b2_sep16_scaffold_4789_17
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17952..18878)
DNA (927bp) protein (309aa)
Hydrophobic amino acid ABC transporter (HAAT) family, permease protein Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=Q2JRZ2_SYNJA
LivM, ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:KFZ90052.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
hydrophobic amino acid ABC transporter permease
PLM3_127_b2_sep16_scaffold_4789_18
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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19041..19655
DNA (615bp) protein (205aa)
Putative uncharacterized protein Tax=uncultured marine microorganism HF4000_APKG5H11 RepID=B3T8J8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:ETX02001.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
NIPSNAP family protein
PLM3_127_b2_sep16_scaffold_4789_19
BJP_IG2103_ACD39_50_23, ACD39, Bacteria

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19732..20319
DNA (588bp) protein (196aa)
Putative uncharacterized protein bin=GWC2_ACD39_50_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_ACD39_50_8 organism_group=ACD39
hypothetical protein
Tax=BJP_IG2103_ACD39_50_23
PLM3_127_b2_sep16_scaffold_4789_20

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20374..21267
DNA (894bp) protein (298aa)
Esterase MY09-2 Tax=uncultured bacterium RepID=E0ZS41_9BACT
Esterase MY09-2 {ECO:0000313|EMBL:ADM67446.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
alpha/beta hydrolase domain-containing protein
PLM3_127_b2_sep16_scaffold_4789_21
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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21307..22329
DNA (1023bp) protein (341aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX01873.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
luciferase-like protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
luciferase-like protein
PLM3_127_b2_sep16_scaffold_4789_22
unknown

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comp(22499..22705)
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying 22 items

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