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PLM3_127_b2_sep16_scaffold_4993

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4993_1
Paraglaciecola psychrophila, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1083)
DNA (1083bp) protein (361aa)
helicase Tax=Ochrobactrum anthropi RepID=UPI0002893B84
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH46821.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola psychrophila 170.;"
PLM3_127_b2_sep16_scaffold_4993_2
unknown

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1287..1469
DNA (183bp) protein (61aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4993_3
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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1509..2591
DNA (1083bp) protein (361aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW92442.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3_127_b2_sep16_scaffold_4993_4
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2855..3022)
DNA (168bp) protein (56aa)
Helicase Tax=Glaciecola psychrophila 170 RepID=K7AXN6_9ALTE
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
PLM3_127_b2_sep16_scaffold_4993_5
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(3348..3779)
DNA (432bp) protein (144aa)
Putative uncharacterized protein Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SKU1_PLABD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY58761.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
PLM3_127_b2_sep16_scaffold_4993_6
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

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comp(3776..4162)
DNA (387bp) protein (129aa)
HTH domain-containing protein, XRE family Tax=Dehalococcoides mccartyi DCMB5 RepID=M1QUF9_9CHLR
HTH domain-containing protein, XRE family
HTH domain-containing protein, XRE family {ECO:0000313|EMBL:AGG05936.1}; species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Dehalococcoides mccartyi DCMB5.;"
PLM3_127_b2_sep16_scaffold_4993_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4616..5275
DNA (660bp) protein (220aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX09249.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein bin=bin7_NC10_sister species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
PLM3_127_b2_sep16_scaffold_4993_8
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5448..6890)
DNA (1443bp) protein (481aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
Multi-sensor signal transduction histidine kinase Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDV5_DESAR
multi-sensor signal transduction histidine kinase
PLM3_127_b2_sep16_scaffold_4993_9
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6894..7580)
DNA (687bp) protein (229aa)
Two component transcriptional regulator, winged helix family Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDV4_DESAR
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEB10451.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
PLM3_127_b2_sep16_scaffold_4993_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7948..9033
DNA (1086bp) protein (362aa)
Putative zinc-binding dehydrogenase Tax=uncultured marine microorganism HF4000_ANIW93N21 RepID=B3T340_9ZZZZ
Alcohol dehydrogenase {ECO:0000313|EMBL:ETW95443.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
mycothiol-dependent formaldehyde dehydrogenase
PLM3_127_b2_sep16_scaffold_4993_11
unknown

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9433..9639
DNA (207bp) protein (69aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4993_12
RBG_16_Nitrospirae_43_11_curated, Nitrospirae, Bacteria

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comp(9676..10245)
DNA (570bp) protein (190aa)
slyD; FKBP-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RBG_16_Nitrospirae_43_11_curated
PLM3_127_b2_sep16_scaffold_4993_13
unknown

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10583..11293
DNA (711bp) protein (237aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4993_14
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11433..12269
DNA (837bp) protein (279aa)
GTPase Era Tax=Syntrophus aciditrophicus (strain SB) RepID=ERA_SYNAS
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
GTP-binding protein
PLM3_127_b2_sep16_scaffold_4993_15
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12278..13000
DNA (723bp) protein (241aa)
hypothetical protein Tax=Nitrospina sp. AB-629-B18 RepID=UPI00037808F7
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
DNA recombination protein RecO
PLM3_127_b2_sep16_scaffold_4993_16
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13080..14819
DNA (1740bp) protein (580aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase Tax=Brevibacillus borstelensis AK1 RepID=M8DJR4_9BACL
PLM3_127_b2_sep16_scaffold_4993_17
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14993..15796
DNA (804bp) protein (268aa)
Adventurous gliding motility protein I Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FMM8_STIAD
agmI; adventurous gliding motility protein I
Adventurous gliding motility protein I {ECO:0000313|EMBL:ADO71809.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM3_127_b2_sep16_scaffold_4993_18
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

15812..16438
DNA (627bp) protein (209aa)
LL-diaminopimelate aminotransferase (EC:2.6.1.83)
Hypothetical aminotransferase YfdZ bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
Displaying 18 items

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