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PLM3_127_b2_sep16_scaffold_9472

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_9472_1
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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2..1741
DNA (1740bp) protein (580aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW98920.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Glycosyl transferase, family 4 bin=GWF2_Lentisphaerae_52_8 species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
glycosyltransferase
PLM3_127_b2_sep16_scaffold_9472_2
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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1934..2506
DNA (573bp) protein (191aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX03973.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Putative Transcription termination/antitermination factor NusG bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative transcription termination/antitermination factor NusG
PLM3_127_b2_sep16_scaffold_9472_3
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(2503..4107)
DNA (1605bp) protein (535aa)
Putative uncharacterized protein Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LKC3_SYNFM
hypothetical protein
Tax=RBG_13_Planctomycetes_60_9_curated
PLM3_127_b2_sep16_scaffold_9472_4
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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4151..5629
DNA (1479bp) protein (493aa)
Uncharacterized protein Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X2M0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ETX06000.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM3_127_b2_sep16_scaffold_9472_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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5675..6091
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PIJ0_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_127_b2_sep16_scaffold_9472_6
unknown

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comp(6275..6907)
DNA (633bp) protein (211aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_9472_7
unknown

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7017..7856
DNA (840bp) protein (280aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_9472_8
unknown

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comp(8005..8391)
DNA (387bp) protein (129aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_9472_9
Tolumonas auensis, Tolumonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8378..9526)
DNA (1149bp) protein (383aa)
Uncharacterized protein Tax=Tolumonas auensis (strain DSM 9187 / TA4) RepID=C4LCC9_TOLAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ94433.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Tolumonas.;" source="Tolumonas auensis (strain DSM 9187 / TA4).;"
PLM3_127_b2_sep16_scaffold_9472_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9466..11121)
DNA (1656bp) protein (552aa)
Putative uncharacterized protein Tax=Geobacter sp. (strain M18) RepID=E8WLL8_GEOS8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25861.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM3_127_b2_sep16_scaffold_9472_11
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11306..12124)
DNA (819bp) protein (273aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
carB; carbamoyl phosphate synthase, large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
PLM3_127_b2_sep16_scaffold_9472_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12118..14613)
DNA (2496bp) protein (832aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
carB; carbamoyl phosphate synthase, large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHG0_9BACT
PLM3_127_b2_sep16_scaffold_9472_13
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14674..15339)
DNA (666bp) protein (222aa)
Carbamoyl phosphate synthase small subunit {ECO:0000313|EMBL:ETW99063.1}; EC=6.3.5.5 {ECO:0000313|EMBL:ETW99063.1};; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
carbamoyl-phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain bin=GWC2_Nitrospirae_57_13 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
PLM3_127_b2_sep16_scaffold_9472_14
R_NC10_66_22, NC10, Bacteria

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comp(15309..15770)
DNA (462bp) protein (154aa)
carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit (EC:6.3.5.5) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
carA; putative carbamoyl-phosphate synthase, small subunit
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_127_b2_sep16_scaffold_9472_15
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15780..17084)
DNA (1305bp) protein (435aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
pyrC; dihydroorotase (EC:3.5.2.3)
Dihydroorotase bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
PLM3_127_b2_sep16_scaffold_9472_16
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(17086..18015)
DNA (930bp) protein (310aa)
Aspartate carbamoyltransferase {ECO:0000313|EMBL:ETX08250.1}; EC=2.1.3.2 {ECO:0000313|EMBL:ETX08250.1};; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase bin=GWC2_Deltaproteobacteria_55_46 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
PLM3_127_b2_sep16_scaffold_9472_17
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18043..18600)
DNA (558bp) protein (186aa)
PyrR bifunctional protein (EC:2.4.2.9)
Bifunctional protein PyrR Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YFH7_DICT6
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3_127_b2_sep16_scaffold_9472_18
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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18925..19644
DNA (720bp) protein (240aa)
Uncharacterized protein Tax=Desulfococcus multivorans DSM 2059 RepID=S7TAB0_DESML
Uncharacterized protein {ECO:0000313|EMBL:EPR34057.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
PLM3_127_b2_sep16_scaffold_9472_19
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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19644..20948
DNA (1305bp) protein (435aa)
Uncharacterized protein Tax=Desulfococcus multivorans DSM 2059 RepID=S7UP10_DESML
Uncharacterized protein {ECO:0000313|EMBL:EPR34058.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
hypothetical protein
Displaying 19 items

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