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PLM3_127_b2_sep16_scaffold_14537

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_14537_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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2..1036
DNA (1035bp) protein (345aa)
3-oxoacyl-(acyl-carrier-protein) synthase 2; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] bin=bin7_NC10_sister species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
3-oxoacyl-ACP synthase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_14537_2
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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1038..2234
DNA (1197bp) protein (399aa)
putative 3-oxoacyl-ACP synthase I bin=bin7_NC10_sister species=Streptomyces rapamycinicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
beta-ketoacyl synthase
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM3_127_b2_sep16_scaffold_14537_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2231..3457
DNA (1227bp) protein (409aa)
Beta-ketoacyl synthase bin=GWC2_Methylomirabilis_70_16 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3-oxoacyl-[acyl-carrier-protein] synthase / Chain length factor
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_14537_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3444..4277
DNA (834bp) protein (278aa)
Beta-ketoacyl synthase bin=GWF2_Methylomirabilis_70_14 species=Thermomonospora curvata genus=Thermomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
beta-ketoacyl synthase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_14537_5
unknown

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4342..4668
DNA (327bp) protein (109aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_14537_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4701..5648
DNA (948bp) protein (316aa)
Glycosyltransferase involved in cell wall biogenesis bin=GWF2_Methylomirabilis_70_14 species=Granulibacter bethesdensis genus=Granulibacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 2 glycosyl transferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_14537_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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5611..6906
DNA (1296bp) protein (432aa)
Flavin-dependent dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=Xanthomonas gardneri genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
oxidoreductase, FAD-binding
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_14537_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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6960..8483
DNA (1524bp) protein (508aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF03_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68332.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3_127_b2_sep16_scaffold_14537_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8579..8899)
DNA (321bp) protein (107aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX08400.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM3_127_b2_sep16_scaffold_14537_10
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8965..9177)
DNA (213bp) protein (71aa)
Uncharacterized protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BUS8_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE13478.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
PLM3_127_b2_sep16_scaffold_14537_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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9424..10194
DNA (771bp) protein (257aa)
Transposase IS4 family protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TEI9_9CHLR
Transposase IS4 family protein {ECO:0000313|EMBL:EFH90362.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
transposase
PLM3_127_b2_sep16_scaffold_14537_12
unknown

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comp(10212..10580)
DNA (369bp) protein (123aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_14537_13
CG_Cyano_02, Cyanobacteria, Bacteria

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comp(10795..11040)
DNA (246bp) protein (82aa)
CopG family transcriptional regulator Tax=Anabaena sp. PCC 7108 RepID=UPI0003493141
hypothetical protein
Tax=CG_Cyano_02
PLM3_127_b2_sep16_scaffold_14537_14
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(11037..11342)
DNA (306bp) protein (102aa)
PilT protein domain protein Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HKR5_CYAP4
twitching motility protein PilT
PilT protein domain protein {ECO:0000313|EMBL:ACL46909.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
PLM3_127_b2_sep16_scaffold_14537_15
Synechococcus sp. PCC 7502, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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11443..12270
DNA (828bp) protein (276aa)
Transposase family protein Tax=Synechococcus sp. PCC 7502 RepID=K9SWV5_9SYNE
transposase family protein
Transposase family protein {ECO:0000313|EMBL:AFY74678.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. PCC 7502.;"
PLM3_127_b2_sep16_scaffold_14537_16
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

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comp(12295..13632)
DNA (1338bp) protein (446aa)
Putative uncharacterized protein bin=GWF2_Lentisphaerae_57_35 species=Simkania negevensis genus=Simkania taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
Tax=RBG_13_Planctomycetes_63_9_curated
PLM3_127_b2_sep16_scaffold_14537_17
unknown

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comp(13798..13944)
DNA (147bp) protein (49aa)
hypothetical protein Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI0003780431
Displaying 17 items

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