ggKbase home page

PLM3_127_b2_sep16_scaffold_19415

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_19415_1
Streptomyces sp. Tu 6176, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..272
-----------------
DNA (270bp)
protein (90aa)
hypothetical protein Tax=Streptomyces sp. AA0539 RepID=UPI00031B7D33
Glyoxalase {ECO:0000313|EMBL:EYT81877.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu 6176.;"
bleomycin resistance protein
PLM3_127_b2_sep16_scaffold_19415_2
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

391..1401
-----------------
DNA (1011bp)
protein (337aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW97074.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Luciferase family protein bin=GWF2_Methylomirabilis_70_14 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
luciferase-like monooxygenase
PLM3_127_b2_sep16_scaffold_19415_3
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1511..1816)
-----------------
DNA (306bp)
protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW94372.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3_127_b2_sep16_scaffold_19415_4
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1813..3168)
-----------------
DNA (1356bp)
protein (452aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB bin=GWC2_Methylomirabilis_70_24 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
MiaB family RNA modification protein
PLM3_127_b2_sep16_scaffold_19415_5
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3172..3831)
-----------------
DNA (660bp)
protein (220aa)
Putative uncharacterized protein Tax=Rhodopirellula baltica (strain SH1) RepID=Q7UT45_RHOBA
Uncharacterized protein {ECO:0000313|EMBL:ETX04058.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
nitrate reductase related protein
PLM3_127_b2_sep16_scaffold_19415_6
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3813..4229)
-----------------
DNA (417bp)
protein (139aa)
Oxidoreductase molybdopterin binding Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZR05_OPITP
Uncharacterized protein {ECO:0000313|EMBL:ETX04058.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
molybdopterin binding oxidoreductase
PLM3_127_b2_sep16_scaffold_19415_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4245..4901)
-----------------
DNA (657bp)
protein (219aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] bin=bin1_lowGC species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin1_lowGC organism_group=Unknown_CP
endonuclease III (DNA-(apurinic orapyrimidinic site) lyase) (EC:4.2.99.18)
Displaying 7 items

View Taxonomy