ggKbase home page

PLM3_127_b2_sep16_scaffold_13629

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_13629_1
unknown

Not on your lists

1..651
DNA (651bp) protein (217aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_13629_2

Not on your lists

675..1871
DNA (1197bp) protein (399aa)
Response regulator receiver protein Tax=uncultured bacterium RepID=K2EA23_9BACT
Response regulator receiver protein {ECO:0000313|EMBL:EKE02829.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
histidine kinase
PLM3_127_b2_sep16_scaffold_13629_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1878..3236
DNA (1359bp) protein (453aa)
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily Tax=Nitrosospira sp. APG3 RepID=M5DLR0_9PROT
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily {ECO:0000313|EMBL:CCU63618.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
type II secretion system protein E
PLM3_127_b2_sep16_scaffold_13629_4
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3246..4202
DNA (957bp) protein (319aa)
Type II secretion system F domain protein bin=GWB2_Deltaproteobacteria_65_81 species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
type II secretion system protein
Tax=GWA2_Deltaproteobacteria_65_63_curated
PLM3_127_b2_sep16_scaffold_13629_5
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4205..4948
DNA (744bp) protein (248aa)
Flp pilus assembly protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LSW0_SYNAS
flp pilus assembly protein
Flp pilus assembly protein {ECO:0000313|EMBL:ABC77166.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
PLM3_127_b2_sep16_scaffold_13629_6
unknown

Not on your lists

4900..5025
DNA (126bp) protein (42aa)
type II secretion system protein
PLM3_127_b2_sep16_scaffold_13629_7
unknown

Not on your lists

5100..5198
DNA (99bp) protein (33aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_13629_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

5500..6756
DNA (1257bp) protein (419aa)
L-seryl-tRNA(Sec) selenium transferase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKP9_THEM7 bin=16ft_combo_ws3_JS1 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_13629_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

6909..10361
DNA (3453bp) protein (1151aa)
Chromosome partition protein Smc Tax=Rhodothermus marinus RepID=D0MFL5_RHOM4 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
chromosome segregation protein SMC
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 9 items

View Taxonomy