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PLM3_127_b2_sep16_scaffold_20099

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_20099_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1..486
DNA (486bp) protein (162aa)
hypothetical protein; K02795 PTS system, mannose-specific IIC component bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_20099_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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488..1237
DNA (750bp) protein (250aa)
PTS system mannose-specific transporter subunit IID bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ptnD; PTS system mannose-specific transporter subunit IID
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_20099_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1271..1540
DNA (270bp) protein (90aa)
Phosphocarrier protein HPr Tax=Geobacter metallireducens RepID=Q39W50_GEOMG bin=16ft_combo_ws3_JS1 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ptsH; phosphocarrier protein HPr
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_20099_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1537..4314
DNA (2778bp) protein (926aa)
Phosphoenolpyruvate-protein phosphotransferase Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8R7R4_THETN bin=16ft_combo_ws3_JS1 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
PtsA; phosphoenolpyruvate-protein kinase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_20099_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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4354..5346
DNA (993bp) protein (331aa)
Glucose-1-phosphate thymidylyltransferase Tax=Pelodictyon luteolum (strain DSM 273) RepID=Q3B530_PELLD bin=16ft_combo_ws3_JS1 species=Pelodictyon luteolum genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
nucleotidyl transferase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_20099_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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5467..6609
DNA (1143bp) protein (381aa)
metK; S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
metK; methionine adenosyltransferase (EC:2.5.1.6)
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_20099_7
unknown

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7262..7888
DNA (627bp) protein (209aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_20099_8
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

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7885..8964
DNA (1080bp) protein (360aa)
Uncharacterized protein Tax=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) RepID=A8H372_SHEPA
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
PLM3_127_b2_sep16_scaffold_20099_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(9180..9386)
DNA (207bp) protein (69aa)
protease Do bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_20099_10
unknown

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10382..10684
DNA (303bp) protein (101aa)

This feature has no annotations

Displaying 10 items

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