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PLM3_127_b2_sep16_scaffold_33873

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_33873_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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2..1258
DNA (1257bp) protein (419aa)
Radical SAM domain-containing protein bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
radical SAM family protein
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_33873_2
RLO_PLX_64_10, Bacteria

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1737..1868
DNA (132bp) protein (44aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Fe/S biogenesis protein NfuA
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_127_b2_sep16_scaffold_33873_3
CSP1_5_NC10, NC10, Bacteria

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1965..3242
DNA (1278bp) protein (426aa)
hypothetical protein bin=bin3_NC10 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin3_NC10 organism_group=NC10
phosphoribosylglycinamide synthetase
Tax=CSP1_5_NC10
PLM3_127_b2_sep16_scaffold_33873_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3239..3778
DNA (540bp) protein (180aa)
alkyl hydroperoxide reductase bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
alkyl hydroperoxide reductase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_33873_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3794..4258
DNA (465bp) protein (155aa)
alkyl hydroperoxide reductase bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
alkyl hydroperoxide reductase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_33873_6
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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comp(4336..6417)
DNA (2082bp) protein (694aa)
Cell surface protein bin=GWB2_Ignavibacteria_35_12 species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
PLM3_127_b2_sep16_scaffold_33873_7
unknown

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comp(6420..6872)
DNA (453bp) protein (151aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_33873_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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7590..8750
DNA (1161bp) protein (387aa)
RND family efflux transporter MFP subunit bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Xanthomonas sacchari genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
HlyD family secretion protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_33873_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

8864..10249
DNA (1386bp) protein (462aa)
AcrB/AcrD/AcrF family protein Tax=Gallaecimonas xiamenensis 3-C-1 RepID=K2JKG1_9GAMM bin=16ft_combo_ws3_JS1 species=Gallaecimonas xiamenensis genus=Gallaecimonas taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
acriflavin resistance protein
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 9 items

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