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PLM3_127_b2_sep16_scaffold_2635

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2635_1
unknown

Not on your lists

comp(2..172)
DNA (171bp) protein (57aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2635_2
unknown

Not on your lists

comp(180..905)
DNA (726bp) protein (242aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2635_3

Not on your lists

1069..1737
DNA (669bp) protein (223aa)
O-acetylhomoserine sulfhydrylase Tax=Caenispirillum salinarum AK4 RepID=K9GVS9_9PROT
Marine sediment metagenome DNA, contig: S01H1_S29705 {ECO:0000313|EMBL:GAG36608.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative CoA-binding protein
PLM3_127_b2_sep16_scaffold_2635_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(1745..3715)
DNA (1971bp) protein (657aa)
Endonuclease/exonuclease/phosphatase-like protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKN3_IGNAJ bin=16ft_combo_ws3_JS1 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Endonuclease/exonuclease/phosphatase-like protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_2635_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

3963..5438
DNA (1476bp) protein (492aa)
Putative uncharacterized protein Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NX97_CHRVO bin=16ft_combo_ws3_JS1 species=Chromobacterium violaceum genus=Chromobacterium taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_2635_6
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5294..7513)
DNA (2220bp) protein (740aa)
hypothetical protein Tax=Kordiimonas gwangyangensis RepID=UPI000371659F
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
PLM3_127_b2_sep16_scaffold_2635_7
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(7510..8343)
DNA (834bp) protein (278aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003651092
sdhB; succinate dehydrogenase and fumarate reductase iron-sulfur protein
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
PLM3_127_b2_sep16_scaffold_2635_8
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

comp(8340..10169)
DNA (1830bp) protein (610aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] bin=bin3_NC10 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1)
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
PLM3_127_b2_sep16_scaffold_2635_9
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10192..11106)
DNA (915bp) protein (305aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000364220E
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
PLM3_127_b2_sep16_scaffold_2635_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(11221..11955)
DNA (735bp) protein (245aa)
protein of unknown function DUF81
Putative uncharacterized protein bin=GWF1_Xanthomonadales_69_6 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=RBG_16_Euryarchaeota_41_19_curated
PLM3_127_b2_sep16_scaffold_2635_11
Geoglobus acetivorans, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(11955..12956)
DNA (1002bp) protein (334aa)
Putative membrane protein Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BCF1_9EURY
Putative membrane protein YeiH
Putative membrane protein YeiH {ECO:0000313|EMBL:AIY90543.1}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus acetivorans.;"
PLM3_127_b2_sep16_scaffold_2635_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12953..14272)
DNA (1320bp) protein (440aa)
Amino acid permease-associated region Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QJW3_SPILD
Amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3) {ECO:0000313|EMBL:CDM64315.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
amino acid permease-associated protein
PLM3_127_b2_sep16_scaffold_2635_13
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(14334..14909)
DNA (576bp) protein (192aa)
cysteine dioxygenase Tax=Stenotrophomonas maltophilia RepID=UPI000313D5F0
Cysteine dioxygenase
Cysteine dioxygenase {ECO:0000313|EMBL:AIE87050.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
PLM3_127_b2_sep16_scaffold_2635_14
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(15023..15388)
DNA (366bp) protein (122aa)
Putative membrane protein Tax=Microcoleus sp. PCC 7113 RepID=K9WBA0_9CYAN bin=16ft_combo_ws3_JS1 species=Microcoleus sp. PCC 7113 genus=Microcoleus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_2635_15
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(15402..16556)
DNA (1155bp) protein (385aa)
Calcium/proton exchanger Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60CG4_METCA bin=16ft_combo_ws3_JS1 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
cax-1; calcium/proton exchanger
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_2635_16
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(16661..16996)
DNA (336bp) protein (112aa)
id=5225038 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_2635_17
unknown

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comp(17027..17119)
DNA (93bp) protein (31aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2635_18
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(17116..17520)
DNA (405bp) protein (135aa)
Multi-sensor signal transduction histidine kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YY2_SOLUE
multi-sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_127_b2_sep16_scaffold_2635_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17588..17983
DNA (396bp) protein (132aa)
Multi-sensor signal transduction histidine kinase Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXY3_OPITP
ATP-binding region ATPase domain protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying 19 items

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