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PLM3_127_b2_sep16_scaffold_2782

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2782_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

2..139
DNA (138bp) protein (46aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_2782_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(243..1808)
DNA (1566bp) protein (522aa)
Uncharacterized protein Tax=Salinibacter ruber RepID=Q2RZW9_SALRD bin=16ft_combo_ws3_JS1 species=Salinibacter ruber genus=Salinibacter taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_2782_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(2384..3346)
DNA (963bp) protein (321aa)
Uncharacterized protein Tax=Rhodothermus marinus RepID=D0MEZ8_RHOM4 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_2782_4
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(3354..3995)
DNA (642bp) protein (214aa)
permease, glycerol uptake facilitator bin=bin3_NC10 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
Glycerol uptake facilitator or related permease
Tax=CSP1_5_NC10
PLM3_127_b2_sep16_scaffold_2782_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(4120..4914)
DNA (795bp) protein (265aa)
cypemycin methyltransferase (EC:2.1.1.-)
Methyltransferase type 12 Tax=Haloarcula RepID=G0HUC6_HALHT bin=16ft_combo_ws3_JS1 species=unknown genus=Haloarcula taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_2782_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(4926..5696)
DNA (771bp) protein (257aa)
Methyltransferase type 12 Tax=Haloarcula RepID=G0HUC6_HALHT bin=16ft_combo_ws3_JS1 species=unknown genus=Haloarcula taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
methylase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_2782_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(5703..7067)
DNA (1365bp) protein (455aa)
steT; amino acid permease; K03294 basic amino acid/polyamine antiporter, APA family bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
putative permease
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_2782_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(7110..8108)
DNA (999bp) protein (333aa)
MoxR-like ATPase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DF22_SINAD bin=16ft_combo_ws3_JS1 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
MoxR-like ATPase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_2782_9
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

8335..9933
DNA (1599bp) protein (533aa)
amidase (EC:3.5.1.4)
Amidase {ECO:0000313|EMBL:ACZ39255.1}; EC=3.5.1.4 {ECO:0000313|EMBL:ACZ39255.1};; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Amidase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4T8_SPHTD
PLM3_127_b2_sep16_scaffold_2782_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(9930..11186)
DNA (1257bp) protein (419aa)
Operon 2450 Gene 2 signal peptide protein Nitrosomon as europaea ATCC 19718 gi Tax=Burkholderia cepacia complex RepID=G7HIF9_9BURK bin=16ft_combo_ws3_JS1 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_2782_11
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(11179..13281)
DNA (2103bp) protein (701aa)
Peptidase S8 and S53 subtilisin kexin sedolisin Tax=Oscillochloris trichoides DG-6 RepID=E1IFV2_9CHLR
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:EFO79910.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
peptidase S8/S53 subtilisin kexin sedolisin
PLM3_127_b2_sep16_scaffold_2782_12
unknown

Not on your lists

comp(13472..13735)
DNA (264bp) protein (88aa)
coagulation factor 5/8 type domain-containing protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Coraliomargarita akajimensis genus=Coraliomargarita taxon_order=Puniceicoccales taxon_class=Opitutae phylum=Verrucomicrobia tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
PLM3_127_b2_sep16_scaffold_2782_13
unknown

Not on your lists

comp(13732..14223)
DNA (492bp) protein (164aa)
coagulation factor 5/8 type domain-containing protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Coraliomargarita akajimensis genus=Coraliomargarita taxon_order=Puniceicoccales taxon_class=Opitutae phylum=Verrucomicrobia tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
PLM3_127_b2_sep16_scaffold_2782_14
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(14220..16088)
DNA (1869bp) protein (623aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 14 items

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