ggKbase home page

PLM3_127_b2_sep16_scaffold_25356

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_25356_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

1..1017
DNA (1017bp) protein (339aa)
Sensor histidine kinase cyclic nucleotide phosphodiesterase, GAF, GAF and HD-GYP-related domain-containing Tax=Geobacter metallireducens RepID=Q39U54_GEOMG bin=16ft_combo_ws3_JS1 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
metal dependent phosphohydrolase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_25356_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

1025..1420
DNA (396bp) protein (132aa)
Two component transcriptional regulator, winged helix family Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S2V2_THEOJ bin=16ft_combo_ws3_JS1 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
two component transcriptional regulator, winged helix family
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_25356_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

2301..3608
DNA (1308bp) protein (436aa)
Primosomal protein N' (Replication factor Y)-superfamily II helicase Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D1C1_PELTS bin=16ft_combo_ws3_JS1 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
PriA; primosomal protein N'
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_25356_4
unknown

Not on your lists

comp(3484..4155)
DNA (672bp) protein (224aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_25356_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(4571..5809)
DNA (1239bp) protein (413aa)
HNH nuclease Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IGI7_ANADE bin=16ft_combo_ws3_JS1 species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
HNH endonuclease
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 5 items

View Taxonomy