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PLM3_127_b2_sep16_scaffold_34871

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_34871_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1..585)
DNA (585bp) protein (195aa)
UPI00026CBFC3 related cluster Tax=unknown RepID=UPI00026CBFC3 bin=16ft_combo_ws3_JS1 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Protein of unknown function DUF2329
Uncharacterized protein {ECO:0000313|EMBL:AHG89210.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_127_b2_sep16_scaffold_34871_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(597..1640)
DNA (1044bp) protein (348aa)
LacI family transcriptional regulator Tax=Rhodanobacter RepID=I4WNC0_9GAMM bin=16ft_combo_ws3_JS1 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
LacI family transcriptional regulator
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_34871_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1945..2655
DNA (711bp) protein (237aa)
short chain dehydrogenase bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
short-chain dehydrogenase/reductase SDR
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_34871_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2814..3494
DNA (681bp) protein (227aa)
thimet oligopeptidase (EC:3.4.24.15); K01392 thimet oligopeptidase [EC:3.4.24.15] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
neurolysin (EC:3.4.24.16)
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_34871_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3494..4759
DNA (1266bp) protein (422aa)
M3 family peptidase (EC:3.4.-.-)
Peptidase, M3 (Thimet oligopeptidase) family Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q092H8_STIAD bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 5 items

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