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PLM3_127_b2_sep16_scaffold_11495

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_11495_1
unknown

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comp(1..75)
DNA (75bp) protein (25aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_11495_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(72..692)
DNA (621bp) protein (207aa)
RNA polymerase sigma factor Tax=Plesiocystis pacifica SIR-1 RepID=A6GDP6_9DELT bin=16ft_combo_ws3_JS1 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
RNA polymerase ECF-type sigma factor
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_11495_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(1087..2661)
DNA (1575bp) protein (525aa)
PAS/PAC Sensor Hybrid Histidine Kinase bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Robiginitalea biformata genus=Robiginitalea taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
multi-sensor signal transduction histidine kinase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_11495_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2921..3919
DNA (999bp) protein (333aa)
putative esterase bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
putative esterase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_11495_5
unknown

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comp(3988..4131)
DNA (144bp) protein (48aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_11495_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

4794..5150
DNA (357bp) protein (119aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Response regulator receiver domain
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_11495_7

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comp(5352..6533)
DNA (1182bp) protein (394aa)
Transposase mutator type Tax=uncultured bacterium RepID=C5JAI0_9BACT
Transposase mutator type {ECO:0000313|EMBL:CAX83773.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transposase mutator type
PLM3_127_b2_sep16_scaffold_11495_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6687..8585
DNA (1899bp) protein (633aa)
Putative glucosamine-6-phosphate isomerase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A967_GEMAT
glucosamine-6-phosphate isomerase
Glucosamine-6-phosphate isomerase {ECO:0000313|EMBL:AHG91144.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_127_b2_sep16_scaffold_11495_9
unknown

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comp(8752..8847)
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 9 items

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