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PLM3_127_b2_sep16_scaffold_11792

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_11792_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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84..986
DNA (903bp) protein (301aa)
Signal recognition particle receptor FtsY Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RCX0_AMMDK bin=16ft_combo_ws3_JS1 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ftsY; signal recognition particle GTPase FtsY
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_11792_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(1041..1913)
DNA (873bp) protein (291aa)
id=5223261 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_11792_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2051..2776
DNA (726bp) protein (242aa)
DNA repair protein RadC Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MEG5_9FIRM bin=16ft_combo_ws3_JS1 species=Pseudoramibacter alactolyticus genus=Pseudoramibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
DNA repair protein RadC
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_11792_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2809..3228
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Rhodothermus marinus RepID=D0MFM6_RHOM4 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
cytoplasmic protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_11792_5
unknown

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3527..3844
DNA (318bp) protein (106aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_11792_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(3908..5071)
DNA (1164bp) protein (388aa)
Peptidase, ArgE/DapE family Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1WRQ5_ANEAE
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_127_b2_sep16_scaffold_11792_7
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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5232..6071
DNA (840bp) protein (280aa)
Uncharacterized protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DE92_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27699.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3_127_b2_sep16_scaffold_11792_8
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6084..7100
DNA (1017bp) protein (339aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034DDAC9
hypothetical protein
Tax=RBG_16_Planctomycetes_64_12_curated
PLM3_127_b2_sep16_scaffold_11792_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(7166..7546)
DNA (381bp) protein (127aa)
Mg chelatase-related protein Tax=Alistipes RepID=I3YLV0_ALIFI bin=16ft_combo_ws3_JS1 species=unknown genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Mg chelatase-like protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying 9 items

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