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PLM3_127_b2_sep16_scaffold_6553

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_6553_1
unknown

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1..72
DNA (72bp) protein (24aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6553_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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69..500
DNA (432bp) protein (144aa)
NusB antitermination factor; K03625 N utilization substance protein B bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
nusB; transcription antitermination factor NusB
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_6553_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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500..1225
DNA (726bp) protein (242aa)
phosphatase family protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
metallophosphoesterase 4
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_6553_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1213..2001
DNA (789bp) protein (263aa)
methyltransferase type 11 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Fibrobacter succinogenes genus=Fibrobacter taxon_order=Fibrobacterales taxon_class=Fibrobacteria phylum=Fibrobacteres tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
methyltransferase type 11
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_6553_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2039..3217
DNA (1179bp) protein (393aa)
putative glycosyltransferase (EC:2.4.-.-) bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Latescibacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
glycosyl transferase group 1
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_6553_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3214..4215
DNA (1002bp) protein (334aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG12_9BACT bin=16ft_combo_ws3_JS1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
membrane protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_6553_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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4215..6815
DNA (2601bp) protein (867aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Pelodictyon phaeoclathratiforme genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_6553_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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6960..7787
DNA (828bp) protein (276aa)
NAD-dependent epimerase/dehydratase bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
NAD-dependent epimerase/dehydratase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_6553_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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7840..8781
DNA (942bp) protein (314aa)
family 2 glycosyl transferase bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
family 2 glycosyl transferase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_6553_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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8796..9488
DNA (693bp) protein (231aa)
Nucleotidyl transferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F931_CONWI bin=16ft_combo_ws3_JS1 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
nucleotidyl transferase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_6553_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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9631..10638
DNA (1008bp) protein (336aa)
putative kinase, galactokinase/mevalonate kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Anaerobaculum hydrogeniformans genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Predicted kinase related to galactokinase and mevalonate kinase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_6553_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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10638..11516
DNA (879bp) protein (293aa)
Glycosyl transferase group 1 Tax=Rhodothermus marinus RepID=D0MGM3_RHOM4 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
group 1 glycosyl transferase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_6553_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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11513..11755
DNA (243bp) protein (81aa)
Glycosyl transferase group 1 Tax=Rhodothermus marinus RepID=D0MGM3_RHOM4 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
group 1 glycosyl transferase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_6553_14
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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11752..13317
DNA (1566bp) protein (522aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFI5_9BACT bin=16ft_combo_ws3_JS1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
membrane protein
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 14 items

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