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PLM3_127_b2_sep16_scaffold_4684

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4684_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1..1059
DNA (1059bp) protein (353aa)
ftsH-2; cell division protein FtsH (EC:3.4.24.-); K03798 cell division protease FtsH [EC:3.4.24.-] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ftsH; cell division protease FtsH
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_4684_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(1422..3578)
DNA (2157bp) protein (719aa)
Fatty oxidation complex, alpha subunit Tax=Nitrococcus mobilis Nb-231 RepID=A4BL13_9GAMM bin=16ft_combo_ws3_JS1 species=Nitrococcus mobilis genus=Nitrococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
fatty oxidation complex, alpha subunit
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_4684_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(3578..4861)
DNA (1284bp) protein (428aa)
3-ketoacyl-CoA thiolase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase Tax=Caldithrix abyssi DSM 13497 RepID=H1XR42_9BACT bin=16ft_combo_ws3_JS1 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_4684_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(4858..5655)
DNA (798bp) protein (266aa)
Uncharacterized protein Tax=Rhodothermus marinus RepID=D0MDY7_RHOM4 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_4684_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

5925..7739
DNA (1815bp) protein (605aa)
Long-chain acyl-CoA synthetase Tax=uncultured Acidobacteria bacterium RepID=H5SH85_9BACT bin=16ft_combo_ws3_JS1 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
AMP-dependent synthetase and ligase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_4684_6
unknown

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comp(7892..8590)
DNA (699bp) protein (233aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4684_7
unknown

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8707..8874
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4684_8
unknown

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9001..9351
DNA (351bp) protein (117aa)

This feature has no annotations

Displaying 8 items

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