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PLM3_127_b2_sep16_scaffold_24650

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_24650_1
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..295)
DNA (294bp) protein (98aa)
Isocitrate dehydrogenase [NADP] (EC:1.1.1.42) bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
isocitrate dehydrogenase (EC:1.1.1.41)
Tax=BJP_IG2102_Syntrophobacterales_60_12
PLM3_127_b2_sep16_scaffold_24650_2
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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403..1572
DNA (1170bp) protein (390aa)
NAD(P)(+) transhydrogenase (AB-specific) {ECO:0000313|EMBL:ACL44604.1}; EC=1.6.1.2 {ECO:0000313|EMBL:ACL44604.1};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
NAD/NADP transhydrogenase alpha subunit Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GM53_9CYAN bin=16ft_combo_ws3_JS1 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
NAD(P)(+) transhydrogenase
PLM3_127_b2_sep16_scaffold_24650_3
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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1569..1868
DNA (300bp) protein (100aa)
NAD(P) transhydrogenase, alpha-2 subunit Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYD8_THERP bin=16ft_combo_ws3_JS1 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
NAD(P) transhydrogenase subunit alpha
NAD(P) transhydrogenase, alpha-2 subunit {ECO:0000313|EMBL:ACM06332.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
PLM3_127_b2_sep16_scaffold_24650_4
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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1865..3229
DNA (1365bp) protein (455aa)
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
NAD/NADP transhydrogenase subunit beta bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
PLM3_127_b2_sep16_scaffold_24650_5
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3366..3647
DNA (282bp) protein (94aa)
hypothetical protein Tax=Amorphus coralli RepID=UPI00037510A4
Cupin {ECO:0000313|EMBL:KGJ10096.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
cupin
PLM3_127_b2_sep16_scaffold_24650_6
CSP1_5_NC10, NC10, Bacteria

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3626..4561
DNA (936bp) protein (312aa)
NAD-dependent epimerase/dehydratase bin=bin3_NC10 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
NAD-dependent epimerase/dehydratase
Tax=CSP1_5_NC10
PLM3_127_b2_sep16_scaffold_24650_7
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(4593..6029)
DNA (1437bp) protein (479aa)
glycogen branching protein (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Flags: Precursor;; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
1,4-alpha-glucan branching enzyme GlgB Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R3Y6_ISOPI
Displaying 7 items

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