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PLM3_127_b2_sep16_scaffold_8868

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_8868_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(3..974)
DNA (972bp) protein (324aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_8868_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(968..3019)
DNA (2052bp) protein (684aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_8868_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(3016..3969)
DNA (954bp) protein (318aa)
yfiL2; ABC transporter ATP-binding protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
yfiL2; ABC transporter ATP-binding protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_8868_4
unknown

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comp(4094..6097)
DNA (2004bp) protein (668aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_8868_5
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6339..6884
DNA (546bp) protein (182aa)
hypothetical protein Tax=Dyella ginsengisoli RepID=UPI00034DB101
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX14751.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
PLM3_127_b2_sep16_scaffold_8868_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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6830..7843
DNA (1014bp) protein (338aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3_127_b2_sep16_scaffold_8868_7
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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7840..9240
DNA (1401bp) protein (467aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003636704
cyclic nucleotide-binding protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM3_127_b2_sep16_scaffold_8868_8
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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9257..9565
DNA (309bp) protein (103aa)
hypothetical protein bin=bin5_DeltaP species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin5_DeltaP organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3_127_b2_sep16_scaffold_8868_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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9558..10157
DNA (600bp) protein (200aa)
response regulator receiver protein (EC:1.8.1.9)
Response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase Tax=Pedosphaera parvula Ellin514 RepID=B9XK57_9BACT
Response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:EEF59695.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_127_b2_sep16_scaffold_8868_10
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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10130..11194
DNA (1065bp) protein (355aa)
gvi:glr0480 thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase (EC:1.8.1.9)
Tax=RBG_13_Acidobacteria_68_16_curated
Displaying 10 items

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