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PLM3_127_b2_sep16_scaffold_9117

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_9117_1
R_Gammaproteobacteria_37_14, Gammaproteobacteria, Proteobacteria, Bacteria

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3..374
DNA (372bp) protein (124aa)
Putative uncharacterized protein bin=GWC2_Chlamydiae_50_10 species=Simkania negevensis genus=Simkania taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWC2_Chlamydiae_50_10 organism_group=Chlamydiae organism_desc=Good +
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_37_14_curated
PLM3_127_b2_sep16_scaffold_9117_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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486..1478
DNA (993bp) protein (331aa)
TGS domain-containing protein; K06944 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
TGS domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_9117_3
unknown

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comp(1490..2866)
DNA (1377bp) protein (459aa)
id=24595422 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
PLM3_127_b2_sep16_scaffold_9117_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(2966..4054)
DNA (1089bp) protein (363aa)
alias=16ft_combo_ws3_scaffold_11554_18 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_9117_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(4087..5985)
DNA (1899bp) protein (633aa)
hypothetical protein bin=bin1_lowGC species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_9117_6
unknown

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6358..6531
DNA (174bp) protein (58aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_9117_7
unknown

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7021..7164
DNA (144bp) protein (48aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_9117_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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7677..8189
DNA (513bp) protein (171aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS72_KORVE bin=16ft_combo_ws3_JS1 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_9117_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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8635..8964
DNA (330bp) protein (110aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_9117_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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9132..10469
DNA (1338bp) protein (446aa)
DEAD/DEAH box helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
RNA helicase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_9117_11
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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10602..11270
DNA (669bp) protein (223aa)
Class II aldolase/adducin family protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LQ22_HALO1
class II aldolase/adducin family protein
Class II aldolase/adducin family protein {ECO:0000313|EMBL:ACY17059.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
PLM3_127_b2_sep16_scaffold_9117_12
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

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11305..11568
DNA (264bp) protein (88aa)
translation initiation factor, aIF-2BI family (EC:5.3.1.23)
Putative methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; MTNA-like protein {ECO:0000256|HAMAP-Rule:MF_01678}; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum boonei (strain DSM 19572 / T469).;"
Putative methylthioribose-1-phosphate isomerase Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TB70_ACIB4
Displaying 12 items

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