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PLM3_127_b2_sep16_scaffold_14550

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_14550_1
unknown

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61..324
DNA (264bp) protein (88aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_14550_2
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

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327..1307
DNA (981bp) protein (327aa)
Integrase Tax=Marinobacter hydrocarbonoclasticus ATCC 49840 RepID=H8W598_MARHY bin=16ft_combo_ws3_JS1 species=Marinobacter hydrocarbonoclasticus genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
bacteriophage integrase
Tax=RBG_16_Acidobacteria_64_8_curated
PLM3_127_b2_sep16_scaffold_14550_trna_1
unknown

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comp(1386..1459)
DNA (74bp)
transferRNA Pro
PLM3_127_b2_sep16_scaffold_14550_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(1476..2207)
DNA (732bp) protein (244aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_14550_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(2204..2950)
DNA (747bp) protein (249aa)
surE; stationary phase survival protein SurE (EC:3.1.3.5)
5'-nucleotidase SurE Tax=Geobacter sulfurreducens RepID=SURE_GEOSL bin=16ft_combo_ws3_JS1 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_14550_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(2947..3657)
DNA (711bp) protein (237aa)
putative glycosyltransferase (EC:2.4.-.-) bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
dolichyl-phosphate mannose synthase related protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_14550_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(3719..4606)
DNA (888bp) protein (296aa)
Lauroyl/myristoyl acyltransferase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEP4_CHLTF bin=16ft_combo_ws3_JS1 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
acyltransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 7 items

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