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PLM3_127_b2_sep16_scaffold_30587

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_30587_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2..271
DNA (270bp) protein (90aa)
50S ribosomal protein L23 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK34_9BACT bin=16ft_combo_ws3_JS1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
rplW; 50S ribosomal protein L23
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_30587_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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290..1114
DNA (825bp) protein (275aa)
50S ribosomal protein L2 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AA40_THEID bin=16ft_combo_ws3_JS1 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
50S ribosomal protein L2
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_30587_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1127..1432
DNA (306bp) protein (102aa)
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chlorobi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
rpsS; 30S ribosomal protein S19
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_30587_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1434..1769
DNA (336bp) protein (112aa)
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
rplV; 50S ribosomal protein L22
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_30587_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1773..2441
DNA (669bp) protein (223aa)
30S ribosomal protein S3 Tax=Caenispirillum salinarum AK4 RepID=K9HFT5_9PROT bin=16ft_combo_ws3_JS1 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
rpsC; 30S ribosomal subunit protein S3
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_30587_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2455..2877
DNA (423bp) protein (141aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
50S ribosomal protein L16
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_30587_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2878..3003
DNA (126bp) protein (42aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 7 items

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