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PLM3_127_b2_sep16_scaffold_19464

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_19464_1
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

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3..1169
DNA (1167bp) protein (389aa)
ABC-type antimicrobial peptide transport system, permease component Tax=Opitutaceae bacterium TAV1 RepID=I6AXF0_9BACT
multidrug ABC transporter substrate-binding protein
Tax=RBG_16_Zixibacteria_43_9_curated
PLM3_127_b2_sep16_scaffold_19464_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1561..2532
DNA (972bp) protein (324aa)
id=5223334 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_19464_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2529..3338
DNA (810bp) protein (270aa)
Methylase involved in ubiquinone/menaquinone biosynthesis Tax=Oscillatoria acuminata PCC 6304 RepID=K9TG89_9CYAN bin=16ft_combo_ws3_JS1 species=Oscillatoria acuminata genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_19464_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3348..3830
DNA (483bp) protein (161aa)
Putative ABC transporter ATP-binding protein Tax=Leptospirillum RepID=J9Z9W8_LEPFM bin=16ft_combo_ws3_JS1 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter ATP-binding protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_19464_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(3866..4240)
DNA (375bp) protein (125aa)
id=5223337 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_19464_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(4325..5587)
DNA (1263bp) protein (421aa)
major facilitator superfamily protein Tax=Bacillus sp. m3-13 RepID=UPI0001E89BF0 bin=16ft_combo_ws3_JS1 species=Bacillus sp. m3-13 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Major Facilitator Superfamily
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_19464_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(5658..6272)
DNA (615bp) protein (205aa)
transcriptional regulator bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
transcriptional regulator
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_19464_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(6327..6962)
DNA (636bp) protein (212aa)
ABC transporter, ATPase subunit; K06147 ATP-binding cassette, subfamily B, bacterial bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ABC transporter ATPase
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 8 items

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