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PLM3_127_b2_sep16_scaffold_12127

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_12127_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3..2756
DNA (2754bp) protein (918aa)
WD40 domain-containing protein Tax=Melioribacter roseus (strain P3M) RepID=I6Z7G7_MELRP bin=16ft_combo_ws3_JS1 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
peptidase S9B dipeptidylpeptidase IV domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_12127_2
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2856..6194
DNA (3339bp) protein (1113aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
pcrA; ATP-dependent DNA helicase PcrA (EC:3.6.4.12)
UvrD/REP helicase Tax=Holophaga foetida DSM 6591 RepID=H1NYX7_9BACT
PLM3_127_b2_sep16_scaffold_12127_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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6178..6477
DNA (300bp) protein (100aa)
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C Tax=Magnetospirillum gryphiswaldense RepID=A4TW06_9PROT bin=16ft_combo_ws3_JS1 species=Magnetospirillum gryphiswaldense genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_12127_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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7803..8111
DNA (309bp) protein (103aa)
aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R260_ISOPI
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_12127_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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8093..9589
DNA (1497bp) protein (499aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B Tax=Caldithrix abyssi DSM 13497 RepID=H1XQR0_9BACT bin=16ft_combo_ws3_JS1 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glutamyl-tRNA(Gln) amidotransferase, B subunit
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_12127_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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9634..10257
DNA (624bp) protein (208aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SMN8_THEM7 bin=16ft_combo_ws3_JS1 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 6 items

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