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PLM3_127_b2_sep16_scaffold_12202

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_12202_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(3..686)
DNA (684bp) protein (228aa)
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K327_DESAC bin=16ft_combo_ws3_JS1 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_12202_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(691..1287)
DNA (597bp) protein (199aa)
Elongation factor Ts Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CNQ6_DESK7 bin=16ft_combo_ws3_JS1 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
elongation factor Ts
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_12202_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(1361..2134)
DNA (774bp) protein (258aa)
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
rpsB; 30S ribosomal protein S2
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_12202_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists


comp(2255..2650)
DNA (396bp) protein (132aa)
rpsI; SSU ribosomal protein S9p (S16e) bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
rplI1; 30S ribosomal protein S9
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_12202_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists


comp(2670..3104)
DNA (435bp) protein (145aa)
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Marinitoga piezophila genus=Marinitoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
50S ribosomal protein L13
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_12202_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(3415..4002)
DNA (588bp) protein (196aa)
Maf-like protein STH370 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Y370_SYMTH bin=16ft_combo_ws3_JS1 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
maf; septum formation protein Maf
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_12202_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(3999..4505)
DNA (507bp) protein (169aa)
D-tyrosyl-tRNA(Tyr) deacylase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H6R8_ANADF bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
D-tyrosyl-tRNA(Tyr) deacylase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_12202_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(4558..5100)
DNA (543bp) protein (181aa)
GTP pyrophosphokinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H2_GEMAT bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
RelA/SpoT family protein
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 8 items

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